Mycobacteroides abscessus (ID 669041) - BioProject

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Accession: PRJNA669041 ID: 669041

Mycobacteroides abscessus

Sequencing of clinical non-tuberculosis Mycobacteria (NTM) isolates

See Genome Information for Mycobacteroides abscessus

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171 additional projects are related by organism.

These are genomic sequences from a number of NTM strains isolated from patients around the world. More...

Accession	PRJNA669041
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Mycobacteroides abscessus[Taxonomy ID: 36809] Bacteria; Bacillati; Actinomycetota; Actinomycetes; Mycobacteriales; Mycobacteriaceae; Mycobacteroides; Mycobacteroides abscessus
Publications	Dedrick RM et al., "Engineered bacteriophages for treatment of a patient with a disseminated drug-resistant Mycobacterium abscessus.", Nat Med, 2019 May;25(5):730-733
Submission	Registration date: 5-Mar-2021 Pittsburgh Bacteriophage Institute - University of Pittsburgh
Related Resources	PhagesDB
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	162
WGS master	57
Genomic DNA	105
Protein Sequences	121108
Publications
PubMed	1
PMC	1
Other datasets
BioSample	81
Assembly	145

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

23
57
80

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_017176465.1	JADWWS000000000		SAMN16839138	GD08	Mycobacteroides abscessus subsp. abscessus
GCA_017176455.1	JADWXB000000000		SAMN16839147	GD30	Mycobacteroides abscessus subsp. massiliense
GCA_017176395.1	JADWXF000000000		SAMN16839151	GD44	Mycobacteroides abscessus subsp. massiliense
GCA_017176315.1	JADWXI000000000		SAMN16839154	GD55	Mycobacteroides abscessus subsp. abscessus
GCA_017176265.1	JADWXJ000000000		SAMN16839155	GD56	Mycobacteroides abscessus subsp. abscessus
GCA_017176275.1	JADWXH000000000		SAMN16839153	GD51	Mycobacteroides abscessus subsp. abscessus
GCA_017176255.1	JADWXG000000000		SAMN16839152	GD47	Mycobacteroides abscessus subsp. abscessus
GCA_017176235.1	JADWXK000000000		SAMN16839156	GD58	Mycobacteroides abscessus subsp. massiliense
GCA_017176115.1	JADWXL000000000		SAMN16839157	GD60	Mycobacteroides abscessus subsp. massiliense
GCA_017176095.1	JADWXN000000000		SAMN16839159	GD62	Mycobacteroides abscessus subsp. abscessus
GCA_017176085.1	JADWXM000000000		SAMN16839158	GD61	Mycobacteroides abscessus subsp. abscessus
GCA_017176075.1	JADWXO000000000		SAMN16839160	GD63	Mycobacteroides abscessus subsp. abscessus
GCA_017176045.1	JADWXP000000000		SAMN16839161	GD64	Mycobacteroides abscessus subsp. abscessus
GCA_017176025.1	JADWXS000000000		SAMN16839164	GD81	Mycobacteroides abscessus subsp. abscessus
GCA_017176015.1	JADWXT000000000		SAMN16839165	GD82	Mycobacteroides abscessus subsp. massiliense
GCA_017175995.1	JADWXQ000000000		SAMN16839162	GD72	Mycobacteroides abscessus subsp. abscessus
GCA_017175975.1	JADWXR000000000		SAMN16839163	GD75	Mycobacteroides abscessus subsp. abscessus
GCA_017175945.1	JADWXU000000000		SAMN16839166	GD84	Mycobacteroides abscessus subsp. abscessus
GCA_017175935.1	JADWXV000000000		SAMN16839167	GD85	Mycobacteroides abscessus subsp. abscessus
GCA_017175905.1	JADWXX000000000		SAMN16839169	GD87	Mycobacteroides abscessus subsp. abscessus
GCA_017175895.1	JADWXW000000000		SAMN16839168	GD86	Mycobacteroides abscessus subsp. abscessus
GCA_017175865.1	JADWYB000000000		SAMN16839173	GD92	Mycobacteroides abscessus subsp. abscessus
GCA_017175855.1	JADWYA000000000		SAMN16839172	GD90	Mycobacteroides abscessus subsp. massiliense
GCA_017175835.1	JADWXY000000000		SAMN16839170	GD88	Mycobacteroides abscessus subsp. abscessus
GCA_017175815.1	JADWYC000000000		SAMN16839174	GD95	Mycobacteroides abscessus subsp. abscessus
GCA_017175795.1	JADWXZ000000000		SAMN16839171	GD89	Mycobacteroides abscessus subsp. abscessus
GCA_017175775.1	JADWYF000000000		SAMN16839177	GD104	Mycobacteroides abscessus subsp. massiliense
GCA_017175735.1	JADWYE000000000		SAMN16839176	GD102	Mycobacteroides abscessus subsp. abscessus
GCA_017175725.1	JADWYD000000000		SAMN16839175	GD97	Mycobacteroides abscessus subsp. abscessus
GCA_017175715.1	JADWYG000000000		SAMN16839178	GD108	Mycobacteroides abscessus subsp. abscessus
GCA_017175695.1	JADWYH000000000		SAMN16839179	GD111	Mycobacteroides abscessus subsp. massiliense
GCA_017175215.1	JADWXE000000000		SAMN16839150	GD40	Mycobacteroides abscessus subsp. abscessus
GCA_017175195.1	JADLKQ000000000		SAMN16581372	GD02	Mycobacteroides abscessus subsp. massiliense
GCA_017175175.1	JADLKZ000000000		SAMN16581381	GD37	Mycobacteroides abscessus subsp. bolletii
GCA_017175145.1	JADLKY000000000		SAMN16581380	GD35	Mycobacteroides abscessus subsp. abscessus
GCA_017175135.1	JADLLA000000000		SAMN16581382	GD45	Mycobacteroides abscessus subsp. abscessus
GCA_017175115.1	JADLLB000000000		SAMN16581383	GD52	Mycobacteroides abscessus subsp. abscessus
GCA_017175065.1	JADWWQ000000000		SAMN16839136	GD03	Mycobacteroides abscessus subsp. massiliense
GCA_017175095.1	JADLLC000000000		SAMN16581385	GD79	Mycobacteroides abscessus subsp. massiliense
GCA_017175055.1	JADWWR000000000		SAMN16839137	GD04	Mycobacteroides abscessus subsp. massiliense
GCA_017175035.1	JADWWT000000000		SAMN16839139	GD09	Mycobacteroides abscessus subsp. abscessus
GCA_017175015.1	JADWWU000000000		SAMN16839140	GD11	Mycobacteroides abscessus subsp. abscessus
GCA_017174995.1	JADWWV000000000		SAMN16839141	GD12	Mycobacteroides abscessus subsp. abscessus
GCA_017174975.1	JADWWX000000000		SAMN16839143	GD14	Mycobacteroides abscessus subsp. abscessus
GCA_017174955.1	JADWWW000000000		SAMN16839142	GD13	Mycobacteroides abscessus subsp. abscessus
GCA_017174925.1	JADWXD000000000		SAMN16839149	GD39	Mycobacteroides abscessus subsp. abscessus
GCA_017174915.1	JADWXC000000000		SAMN16839148	GD36	Mycobacteroides abscessus subsp. abscessus
GCA_017174895.1	JADWXA000000000		SAMN16839146	GD18	Mycobacteroides abscessus subsp. abscessus
GCA_017174855.1	JADWWY000000000		SAMN16839144	GD15	Mycobacteroides abscessus subsp. abscessus
GCA_017174865.1	JADWWZ000000000		SAMN16839145	GD16	Mycobacteroides abscessus subsp. massiliense
GCA_017176675.1	JADLKS000000000		SAMN16581374	GD23	Mycobacteroides abscessus subsp. abscessus
GCA_017176655.1	JADLKR000000000		SAMN16581373	GD10	Mycobacteroides abscessus subsp. massiliense
GCA_017176635.1	JADLKT000000000		SAMN16581375	GD24	Mycobacteroides abscessus subsp. abscessus
GCA_017176615.1	JADLKU000000000		SAMN16581376	GD27	Mycobacteroides abscessus subsp. abscessus
GCA_017176595.1	JADLKV000000000		SAMN16581377	GD28	Mycobacteroides abscessus subsp. abscessus
GCA_017176575.1	JADLKW000000000		SAMN16581378	GD33	Mycobacteroides abscessus subsp. abscessus
GCA_017176555.1	JADLKX000000000		SAMN16581379	GD34	Mycobacteroides abscessus subsp. abscessus
GCA_017189435.1		1	SAMN16828760	GD43A	Mycobacteroides abscessus subsp. abscessus
GCA_017189415.1		1	SAMN16828761	GD43B	Mycobacteroides abscessus subsp. abscessus
GCA_017189395.1		2	SAMN16828762	GD54	Mycobacteroides abscessus subsp. abscessus
GCA_017189375.1		1	SAMN16828763	GD57	Mycobacteroides abscessus subsp. abscessus
GCA_017189355.1		1	SAMN16828764	GD59	Mycobacteroides abscessus subsp. abscessus
GCA_017190595.1		3	SAMN16828759	GD42	Mycobacteroides abscessus subsp. abscessus
GCA_017190535.1		1	SAMN16828765	GD68A	Mycobacteroides abscessus subsp. massiliense
GCA_017190875.1		3	SAMN16828757	GD21	Mycobacteroides abscessus subsp. abscessus
GCA_017190795.1		1	SAMN16828756	GD05	Mycobacteroides abscessus subsp. abscessus
GCA_017190695.1		1	SAMN16828758	GD41	Mycobacteroides abscessus subsp. abscessus
GCA_017183975.1		1	SAMN16828766	GD68B	Mycobacteroides abscessus subsp. massiliense
GCA_017183955.1		3	SAMN16828767	GD69A	Mycobacteroides abscessus subsp. abscessus
GCA_017183935.1		3	SAMN16828768	GD69B	Mycobacteroides abscessus subsp. abscessus
GCA_017183915.1		1	SAMN16828769	GD91	Mycobacteroides abscessus subsp. bolletii
GCA_017183895.1		2	SAMN16828770	GD100A	Mycobacteroides abscessus subsp. abscessus
GCA_017183875.1		2	SAMN16828771	GD100B	Mycobacteroides abscessus subsp. abscessus
GCA_017183855.1		1	SAMN16581384	GD53	Mycobacteroides abscessus subsp. massiliense
GCA_017183555.1		1	SAMN16431561	GD38	Mycobacteroides abscessus subsp. abscessus
GCA_017183775.1		3	SAMN16431558	GD22	Mycobacteroides abscessus subsp. abscessus
GCA_017183655.1		4	SAMN16431559	GD25	Mycobacteroides abscessus subsp. abscessus
GCA_017183735.1		1	SAMN16431560	GD26	Mycobacteroides abscessus subsp. abscessus
GCA_017183815.1		2	SAMN16431556	GD19	Mycobacteroides abscessus subsp. abscessus
GCA_017183795.1		1	SAMN16431557	GD20	Mycobacteroides abscessus subsp. abscessus

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Mycobacteroides abscessus

Sequencing of clinical non-tuberculosis Mycobacteria (NTM) isolates

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