Enterococcus faecium (ID 673360) - BioProject

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Accession: PRJNA673360 ID: 673360

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Whole genome sequencing of Enterococcus faecium isolated from blood and stool. More...

Accession	PRJNA673360
Data Type	Genome sequencing and assembly, Raw sequence reads, Phenotype or Genotype
Scope	Multiisolate
Organism	Enterococcus faecium[Taxonomy ID: 1352] Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus; Enterococcus faecium
Publications	Kinnear CL et al., "Daptomycin treatment impacts resistance in off-target populations of vancomycin-resistant Enterococcus faecium.", PLoS Biol, 2020 Dec;18(12):e3000987 Riou F et al., "[Clinical guidelines: what are the viewpoints of physicians and housestaff working in hospital medical departments?].", Rev Epidemiol Sante Publique, 2005 Sep;53 Spec No 1:1S57-66
Grants	"Population Dynamics of Rotavirus: A Combined Theoretical, Bioinformatic and Laboratory Based Approach" (Grant ID K08 AI119182, National Institute of Allergy and Infectious Diseases Extramural Activities) "Dynamical modeling of hospital transmission and antibiotic resistance evolution in a multidrug resistant nosocomial pathogen" (Grant ID R01 AI143852, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 30-Apr-2021 University of Michigan
Relevance	Medical

Project Data:

Assembly level

Number of Assemblies

2
3
5

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_018219345.1	11	SAMN16327723	PR00859-7	Enterococcus faecium
GCA_018219325.1	8	SAMN16327730	PR01996-12	Enterococcus faecium
GCA_018219305.1	7	SAMN16327755	PR02648-8	Enterococcus faecium
GCA_018219285.1	11	SAMN16327791	PR05720-3	Enterococcus faecium
GCA_018296025.1	10	SAMN16327741	PR02395-7	Enterococcus faecium

Parameter	Value
Data volume, Gbases	42
Data volume, Mbytes	18180