Skin metagenome (ID 694925) - BioProject

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Accession: PRJNA694925 ID: 694925

Skin metagenome

Uncovering new skin microbiome diversity through culturing and metagenomics

Metagenomes, cultured reference genomes and metagenome assembled genomes Pure cultures

Accession	PRJNA694925
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 26-Jan-2021 NHGRI/NIH
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	153
WGS master	149
Genomic DNA	4
SRA Experiments	202
Protein Sequences	4823
Other datasets
BioSample	201
Assembly	151
Supplementary data
Base modification	3

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

2
149
151

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_022346505.1	JAKRML000000000		SAMN17729905	ACRQX	Achromobacter sp. ACRQX
GCA_022346585.1	JAKRCV000000000		SAMN17729907	ACRQZ	Arsenicicoccus bolidensis
GCA_020739985.1	JAJGBE000000000		SAMN17729816	AATZK	Bacillus cereus
GCA_020831385.1	JAJHQA000000000		SAMN17729820	AATZO	Bacillus thuringiensis
GCA_022346485.1	JAKRMO000000000		SAMN17729909	ACRRE	Brachybacterium sp. ACRRE
GCA_022346405.1	JAKRCY000000000		SAMN17729910	ACRRF	Brevibacillus laterosporus
GCA_022346385.1	JAKRCZ000000000		SAMN17729911	ACRRG	Brevibacterium ravenspurgense
GCA_022346365.1	JAKRMN000000000		SAMN17729912	ACRRH	Brevibacterium sp. ACRRH
GCA_022346825.1	JAKREK000000000		SAMN17729933	ACRSD	Caballeronia zhejiangensis
GCA_022346185.1	JAKRMS000000000		SAMN17729913	ACRRI	Cellulomonas sp. ACRRI
GCA_022345775.1	JAKRDQ000000000		SAMN17729914	ACRRJ	Chryseobacterium taklimakanense
GCA_022346345.1	JAKRDA000000000		SAMN17729878	ACRPU	Corynebacterium afermentans
GCA_022346305.1	JAKRDB000000000		SAMN17729899	ACRQQ	Corynebacterium afermentans
GCA_022346315.1	JAKRDC000000000		SAMN17729879	ACRPV	Corynebacterium afermentans
GCA_022346265.1	JAKRDD000000000		SAMN17729880	ACRPW	Corynebacterium amycolatum
GCA_022346165.1	JAKRDE000000000		SAMN17729884	ACRQA	Corynebacterium aurimucosum
GCA_022347215.1	JAKRDY000000000		SAMN17729873	CTNIH7	Corynebacterium aurimucosum
GCA_022347185.1	JAKRDZ000000000		SAMN17729887	ACRQE	Corynebacterium freneyi
GCA_022346125.1	JAKRDG000000000		SAMN17729889	ACRQG	Corynebacterium hadale
GCA_022346135.1	JAKRDH000000000		SAMN17729890	ACRQH	Corynebacterium hadale
GCA_022346085.1	JAKRDI000000000		SAMN17729891	ACRQI	Corynebacterium hadale
GCA_022346065.1	JAKRDJ000000000		SAMN17729888	ACRQF	Corynebacterium imitans
GCA_022345795.1	JAKRDS000000000		SAMN17729871	ACRPN	Corynebacterium kefirresidentii
GCA_022347295.1	JAKRDW000000000		SAMN17729861	ACROY	Corynebacterium kefirresidentii
GCA_022345885.1	JAKRDL000000000		SAMN17729897	ACRQO	Corynebacterium minutissimum
GCA_022345875.1	JAKRDK000000000		SAMN17729885	ACRQC	Corynebacterium minutissimum
GCA_022345925.1	JAKRDM000000000		SAMN17729900	ACRQS	Corynebacterium propinquum
GCA_022345865.1	JAKRDN000000000		SAMN17729901	ACRQT	Corynebacterium pseudodiphtheriticum
GCA_022345825.1	JAKRDO000000000		SAMN17729902	ACRQU	Corynebacterium simulans
GCA_022346285.1	JAKRDF000000000		SAMN17729903	ACRQV	Corynebacterium singulare
GCA_022347435.1	JAKRNA000000000		SAMN17729866	CTNIH5	Corynebacterium sp. ACRPE
GCA_022347395.1	JAKRNB000000000		SAMN17729867	ACRPF	Corynebacterium sp. ACRPF
GCA_022347285.1	JAKRND000000000		SAMN17729868	ACRPH	Corynebacterium sp. ACRPH
GCA_022347345.1	JAKRNC000000000		SAMN17729869	ACRPJ	Corynebacterium sp. ACRPJ
GCA_022347205.1	JAKRNE000000000		SAMN17729872	ACRPO	Corynebacterium sp. ACRPO
GCA_022347225.1	JAKRNF000000000		SAMN17729874	CTNIH8	Corynebacterium sp. ACRPQ
GCA_022346095.1	JAKRMW000000000		SAMN17729875	ACRPR	Corynebacterium sp. ACRPR
GCA_022346005.1	JAKRMY000000000		SAMN17729876	ACRPS	Corynebacterium sp. ACRPS
GCA_022346225.1	JAKRMP000000000		SAMN17729881	ACRPX	Corynebacterium sp. ACRPX
GCA_022346245.1	JAKRMQ000000000		SAMN17729882	ACRPY	Corynebacterium sp. ACRPY
GCA_022346205.1	JAKRMR000000000		SAMN17729883	ACRPZ	Corynebacterium sp. ACRPZ
GCA_022346045.1	JAKRMT000000000		SAMN17729892	ACRQJ	Corynebacterium sp. ACRQJ
GCA_022345965.1	JAKRMU000000000		SAMN17729893	ACRQK	Corynebacterium sp. ACRQK
GCA_022346015.1	JAKRMV000000000		SAMN17729894	ACRQL	Corynebacterium sp. ACRQL
GCA_022345985.1	JAKRMX000000000		SAMN17729895	ACRQM	Corynebacterium sp. ACRQM
GCA_022345915.1	JAKRMZ000000000		SAMN17729898	ACRQP	Corynebacterium sp. ACRQP
GCA_022347325.1	JAKRDU000000000		SAMN17729860	CTNIH2	Corynebacterium sp. CTNIH2
GCA_022345765.1	JAKRDR000000000		SAMN17729870	CTNIH6	Corynebacterium sp. CTNIH6
GCA_022345785.1	JAKRDP000000000		SAMN17729904	ACRQW	Corynebacterium striatum
GCA_030450155.1		2	SAMN17729862	CTNIH23	Corynebacterium tuberculostearicum
GCA_022347335.1	JAKRDV000000000		SAMN17729859	CTNIH1	Corynebacterium tuberculostearicum
GCA_022347235.1	JAKRDX000000000		SAMN17729864	CTNIH3	Corynebacterium tuberculostearicum
GCA_022347385.1	JAKRDT000000000		SAMN17729865	CTNIH4	Corynebacterium tuberculostearicum
GCA_022346865.1	JAKREI000000000		SAMN17729934	ACRSE	Cutibacterium avidum
GCA_022347135.1	JAKREA000000000		SAMN17729915	ACRRK	Dermabacter vaginalis
GCA_022347145.1	JAKREB000000000		SAMN17729916	ACRRL	Dermacoccus nishinomiyaensis
GCA_022347125.1	JAKRNG000000000		SAMN17729919	ACRRO	Helcobacillus sp. ACRRO
GCA_022347065.1	JAKREC000000000		SAMN17729920	ACRRP	Kocuria marina subsp. indica
GCA_022347075.1	JAKRED000000000		SAMN17729921	ACRRQ	Kocuria rhizophila
GCA_022347025.1	JAKREE000000000		SAMN17729922	ACRRR	Lysinibacillus fusiformis
GCA_022347105.1	JAKREG000000000		SAMN17729923	ACRRS	Macrococcus epidermidis
GCA_022347035.1	JAKREF000000000		SAMN17729924	ACRRT	Microbacterium aurum
GCA_022346945.1	JAKRNI000000000		SAMN17729925	ACRRU	Microbacterium sp. ACRRU
GCA_022346985.1	JAKRNH000000000		SAMN17729926	ACRRV	Micrococcus sp. ACRRV
GCA_022346925.1	JAKRNJ000000000		SAMN17729927	ACRRW	Microvirga sp. ACRRW
GCA_022346965.1	JAKREH000000000		SAMN17729863	ACRPA	Moraxella nonliquefaciens
GCA_022346885.1	JAKRNK000000000		SAMN17729928	ACRRX	Paenibacillus sp. ACRRX
GCA_022346995.1	JAKRNM000000000		SAMN17729929	ACRRY	Paenibacillus sp. ACRRY
GCA_022346845.1	JAKRNP000000000		SAMN17729930	ACRSA	Paenibacillus sp. ACRSA
GCA_022346905.1	JAKRNL000000000		SAMN17729931	ACRSB	Pantoea sp. ACRSB
GCA_022346785.1	JAKRNN000000000		SAMN17729932	ACRSC	Pantoea sp. ACRSC
GCA_022346765.1	JAKRNO000000000		SAMN17729937	ACRSH	Pantoea sp. ACRSH
GCA_022346455.1	JAKRCX000000000		SAMN17729896	ACRQN	Priestia flexa
GCA_022346425.1	JAKRCW000000000		SAMN17729908	ACRRA	Pseudoglutamicibacter albus
GCA_022346805.1	JAKREJ000000000		SAMN17729935	ACRSF	Pseudomonas luteola
GCA_022346735.1	JAKREM000000000		SAMN17729886	ACRQD	Roseomonas mucosa
GCA_022346705.1	JAKREL000000000		SAMN17729938	ACRSI	Roseomonas mucosa
GCA_022346725.1	JAKRNQ000000000		SAMN17729936	ACRSG	Roseomonas sp. ACRSG
GCA_022346565.1	JAKREP000000000		SAMN17729939	ACRSJ	Salinicoccus roseus
GCA_022346685.1	JAKRNR000000000		SAMN17729940	ACRSK	Sphingomonas sp. ACRSK
GCA_022346605.1	JAKRNT000000000		SAMN17729941	ACRSL	Sporosarcina sp. ACRSL
GCA_022346545.1	JAKRNU000000000		SAMN17729942	ACRSM	Sporosarcina sp. ACRSM
GCA_022288745.1	JAKOPJ000000000		SAMN17729821	ABFQN	Staphylococcus argenteus
GCA_020906975.2		2	SAMN17729804	AATYW	Staphylococcus aureus
GCA_022288695.1	JAKOPI000000000		SAMN17729854	ABKWV	Staphylococcus aureus
GCA_022326745.1	JAKOEW000000000		SAMN17729828	ABFQZ	Staphylococcus aureus
GCA_022321765.1	JAKOEU000000000		SAMN17729827	ABFQY	Staphylococcus aureus
GCA_022321745.1	JAKOEV000000000		SAMN17729829	ABFRA	Staphylococcus aureus
GCA_022321685.1	JAKOES000000000		SAMN17729823	ABFQP	Staphylococcus aureus
GCA_022321705.1	JAKOET000000000		SAMN17729822	ABFQO	Staphylococcus aureus
GCA_022321665.1	JAKOER000000000		SAMN17729824	ABFQR	Staphylococcus aureus
GCA_022321625.1	JAKOEQ000000000		SAMN17729825	ABFQS	Staphylococcus aureus
GCA_020906865.1	JAJJPQ000000000		SAMN17729831	ABFRC	Staphylococcus aureus
GCA_020907145.1	JAJJQC000000000		SAMN17729826	ABFQU	Staphylococcus aureus
GCA_020907125.1	JAJJPZ000000000		SAMN17729812	AATZE	Staphylococcus aureus
GCA_020907085.1	JAJJQA000000000		SAMN17729811	AATZD	Staphylococcus aureus
GCA_020907065.1	JAJJQB000000000		SAMN17729810	AATZC	Staphylococcus aureus
GCA_020907025.1	JAJJPX000000000		SAMN17729798	AATYP	Staphylococcus aureus
GCA_020907005.1	JAJJPV000000000		SAMN17729800	AATYS	Staphylococcus aureus
GCA_020907035.1	JAJJPY000000000		SAMN17729813	AATZF	Staphylococcus aureus
GCA_020906965.1	JAJJPW000000000		SAMN17729799	AATYR	Staphylococcus aureus
GCA_020906945.1	JAJJPS000000000		SAMN17729833	ABFRF	Staphylococcus aureus
GCA_020906925.1	JAJJPT000000000		SAMN17729832	ABFRE	Staphylococcus aureus
GCA_020906905.1	JAJJPR000000000		SAMN17729830	ABFRB	Staphylococcus aureus
GCA_022346665.1	JAKREN000000000		SAMN17729877	ACRPT	Staphylococcus auricularis
GCA_020739965.1	JAJGBA000000000		SAMN17729806	AATYY	Staphylococcus capitis
GCA_020740105.1	JAJGBC000000000		SAMN17729805	AATYX	Staphylococcus capitis
GCA_020740075.1	JAJGAZ000000000		SAMN17729808	AATZA	Staphylococcus capitis
GCA_020740065.1	JAJGBF000000000		SAMN17729815	AATZJ	Staphylococcus capitis
GCA_020740145.1	JAJGBB000000000		SAMN17729807	AATYZ	Staphylococcus capitis
GCA_020907105.1	JAJJQD000000000		SAMN17729803	AATYV	Staphylococcus capitis
GCA_020907205.1	JAJJQG000000000		SAMN17729795	AATYL	Staphylococcus capitis
GCA_020907185.1	JAJJQF000000000		SAMN17729796	AATYM	Staphylococcus capitis
GCA_020907165.1	JAJJQE000000000		SAMN17729801	AATYT	Staphylococcus capitis
GCA_026420045.1	JAKTAE000000000		SAMN17729851	ABKVN	Staphylococcus epidermidis
GCA_022353125.1	JAKSAR000000000		SAMN17729850	ABKVM	Staphylococcus epidermidis
GCA_022352485.1	JAKSAT000000000		SAMN17729858	ABKXB	Staphylococcus epidermidis
GCA_022352465.1	JAKSAS000000000		SAMN17729794	AAKNS	Staphylococcus epidermidis
GCA_022353085.1	JAKSAQ000000000		SAMN17729818	AATZM	Staphylococcus epidermidis
GCA_022353065.1	JAKSAP000000000		SAMN17729819	AATZN	Staphylococcus epidermidis
GCA_022353005.1	JAKSAL000000000		SAMN17729835	ABKUW	Staphylococcus epidermidis
GCA_022353015.1	JAKSAM000000000		SAMN17729834	ABFRH	Staphylococcus epidermidis
GCA_022353025.1	JAKSAN000000000		SAMN17729793	AAJWJ	Staphylococcus epidermidis
GCA_022352985.1	JAKSAK000000000		SAMN17729836	ABKUY	Staphylococcus epidermidis
GCA_022352925.1	JAKSAI000000000		SAMN17729838	ABKVA	Staphylococcus epidermidis
GCA_022352895.1	JAKSAH000000000		SAMN17729839	ABKVB	Staphylococcus epidermidis
GCA_022352855.1	JAKSAB000000000		SAMN17729846	ABKVI	Staphylococcus epidermidis
GCA_022352845.1	JAKSAG000000000		SAMN17729840	ABKVC	Staphylococcus epidermidis
GCA_022352745.1	JAKSAE000000000		SAMN17729842	ABKVE	Staphylococcus epidermidis
GCA_022352725.1	JAKSAC000000000		SAMN17729845	ABKVH	Staphylococcus epidermidis
GCA_022352705.1	JAKSAF000000000		SAMN17729841	ABKVD	Staphylococcus epidermidis
GCA_022352685.1	JAKSAD000000000		SAMN17729844	ABKVG	Staphylococcus epidermidis
GCA_022352615.1	JAKRZZ000000000		SAMN17729848	ABKVK	Staphylococcus epidermidis
GCA_022352605.1	JAKSAA000000000		SAMN17729847	ABKVJ	Staphylococcus epidermidis
GCA_022352535.1	JAKRZY000000000		SAMN17729843	ABKVF	Staphylococcus epidermidis
GCA_022352885.1	JAKSAJ000000000		SAMN17729837	ABKUZ	Staphylococcus epidermidis
GCA_022353135.1	JAKSAO000000000		SAMN17729797	AATYN	Staphylococcus epidermidis
GCA_022428405.1	JAKTAF000000000		SAMN17729849	ABKVL	Staphylococcus epidermidis
GCA_022428385.1	JAKTAC000000000		SAMN17729853	ABKVQ	Staphylococcus epidermidis
GCA_022428355.1	JAKTAB000000000		SAMN17729855	ABKWY	Staphylococcus epidermidis
GCA_022428305.1	JAKTAA000000000		SAMN17729856	ABKWZ	Staphylococcus epidermidis
GCA_022428325.1	JAKSZZ000000000		SAMN17729857	ABKXA	Staphylococcus epidermidis
GCA_022426545.1	JAKTAD000000000		SAMN17729852	ABKVP	Staphylococcus epidermidis
GCA_022426515.1	JAKTAG000000000		SAMN17729802	AATYU	Staphylococcus epidermidis
GCA_020740045.1	JAJGBD000000000		SAMN17729817	AATZL	Staphylococcus hominis
GCA_020740025.1	JAJGBG000000000		SAMN17729814	AATZI	Staphylococcus hominis
GCA_020740115.1	JAJGAY000000000		SAMN17729809	AATZB	Staphylococcus hominis
GCA_022346615.1	JAKRNS000000000		SAMN17729943	ACRSN	Staphylococcus sp. ACRSN
GCA_022346515.1	JAKREQ000000000		SAMN17729917	ACRRM	Staphylococcus warneri
GCA_022346625.1	JAKREO000000000		SAMN17729918	ACRRN	Streptococcus cristatus
GCA_022346435.1	JAKRMM000000000		SAMN17729906	ACRQY	Winkia sp. ACRQY

SRA Data Details

Parameter	Value
Data volume, Gbases	697
Data volume, Tbytes	0.26

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Skin metagenome

Uncovering new skin microbiome diversity through culturing and metagenomics

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