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Accession: PRJNA639799 ID: 639799

irrigation water pre-enrichment spiked with ten fold dilutions of STEC EDL 933 O157:H7

irrigation water pre-enrichment spiked with ten fold dilutions of STEC EDL 933 O157:H7 Metagenome

See Genome Information for Escherichia coli
These are 24 hours pre-enrichments of irrigation water that were added ten fold dilutions of Shiga toxin producing Escherichia coli strain EDL 933 O157:H7 to determine nanopore sequencing detection limit and assembly (either completely closed or fragmented) of the spiked STEC strain.
AccessionPRJNA639799
Data TypeMetagenome
ScopeEnvironment
SubmissionRegistration date: 16-Jun-2020
Food and Drug Administration-College Park
RelevanceEnvironmental
Locus Tag PrefixP7249
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)3
SRA Experiments21
Other datasets
BioSample20
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases142
Data volume, Tbytes0.12

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