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Accession: PRJEB62643 ID: 998688

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Hospital-wide pathogen transmission surveillance combining epidemiological, genetic, and spectroscopic approaches

Hospital-wide pathogen transmission surveillance combining epidemiological, genetic, and spectroscopic approaches
AccessionPRJEB62643
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 26-Jul-2023
medizinische mikrobiologie und hygiene universitaetsklinikum tuebingen
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)17191
WGS master97
Other datasets
BioSample97
Assembly97
Assembly details:
Assembly levelNumber of Assemblies
93
4
97
AssemblyLevelWGSBioSampleTaxonomy
GCA_954767965.1ScaffoldCATOWF000000000SAMEA113581048
GCA_954736865.1ScaffoldCATOWA000000000SAMEA113581062
GCA_954736775.1ScaffoldCATOVZ000000000SAMEA113581054
GCA_954735425.1ScaffoldCATOVX000000000SAMEA113581053
GCA_954773325.1ScaffoldCATOWQ000000000SAMEA113581046
GCA_954768375.1ScaffoldCATOWN000000000SAMEA113581047
GCA_954768345.1ScaffoldCATOWI000000000SAMEA113581050
GCA_954789555.1ScaffoldCATOZI000000000SAMEA113581067
GCA_954788275.1ScaffoldCATOYX000000000SAMEA113581058
GCA_954785675.1ScaffoldCATOYV000000000SAMEA113581068
GCA_954782585.1ScaffoldCATOYQ000000000SAMEA113581059
GCA_954781845.1ScaffoldCATOYO000000000SAMEA113581057
GCA_954781045.1ScaffoldCATOYL000000000SAMEA113581069
GCA_954780765.1ScaffoldCATOYK000000000SAMEA113581066
GCA_954780335.1ScaffoldCATOYE000000000SAMEA113581064
GCA_954780345.1ScaffoldCATOYF000000000SAMEA113581065
GCA_954780355.1ScaffoldCATOYC000000000SAMEA113581063
GCA_954778255.1ScaffoldCATOXT000000000SAMEA113581060
GCA_954778005.1ContigCATOXR000000000SAMEA113581051
GCA_954777635.1ScaffoldCATOXM000000000SAMEA113581052
GCA_954777715.1ScaffoldCATOXS000000000SAMEA113581061
GCA_954774205.1ScaffoldCATOXD000000000SAMEA113581056
GCA_954774115.1ScaffoldCATOXJ000000000SAMEA113581049
GCA_954778165.1ScaffoldCATOXY000000000SAMEA113581055
GCA_954777785.1ScaffoldCATOXN000000000SAMEA113581077
GCA_954767975.1ScaffoldCATOWH000000000SAMEA113581070
GCA_954767925.1ScaffoldCATOWD000000000SAMEA113581074
GCA_954780375.1ScaffoldCATOYG000000000SAMEA113581075
GCA_954781315.1ScaffoldCATOYM000000000SAMEA113581081
GCA_954773885.1ScaffoldCATOXG000000000SAMEA113581079
GCA_954773855.1ScaffoldCATOWW000000000SAMEA113581071
GCA_954774105.1ScaffoldCATOXF000000000SAMEA113581072
GCA_954780515.1ScaffoldCATOYI000000000SAMEA113581076
GCA_954789365.1ScaffoldCATOZD000000000SAMEA113581078
GCA_954789565.1ScaffoldCATOZH000000000SAMEA113581073
GCA_954789515.1ScaffoldCATOZC000000000SAMEA113581080
GCA_954725565.1ScaffoldCATOVU000000000SAMEA113581101
GCA_954725635.1ScaffoldCATOVT000000000SAMEA113581102
GCA_954722005.1ScaffoldCATOVR000000000SAMEA113581104
GCA_954734725.1ScaffoldCATOVW000000000SAMEA113581097
GCA_954773355.1ScaffoldCATOWP000000000SAMEA113581096
GCA_954768205.1ScaffoldCATOWL000000000SAMEA113581084
GCA_954768155.1ScaffoldCATOWK000000000SAMEA113581092
GCA_954768315.1ScaffoldCATOWM000000000SAMEA113581088
GCA_954773055.1ScaffoldCATOWS000000000SAMEA113581087
GCA_954773095.1ScaffoldCATOWU000000000SAMEA113581082
GCA_954814235.1ScaffoldCATOZJ000000000SAMEA113581095
GCA_954789495.1ScaffoldCATOZG000000000SAMEA113581093
GCA_954789535.1ScaffoldCATOZF000000000SAMEA113581098
GCA_954785615.1ScaffoldCATOYT000000000SAMEA113581103
GCA_954781815.1ScaffoldCATOYP000000000SAMEA113581100
GCA_954773995.1ScaffoldCATOXB000000000SAMEA113581085
GCA_954773915.1ScaffoldCATOWZ000000000SAMEA113581099
GCA_954774165.1ScaffoldCATOXI000000000SAMEA113581086
GCA_954774005.1ScaffoldCATOXC000000000SAMEA113581083
GCA_954773315.1ScaffoldCATOWT000000000SAMEA113581091
GCA_954778345.1ScaffoldCATOXZ000000000SAMEA113581089
GCA_954778715.1ScaffoldCATOYA000000000SAMEA113581107
GCA_954778475.1ScaffoldCATOXV000000000SAMEA113581090
GCA_954779855.1ScaffoldCATOYD000000000SAMEA113581094
GCA_954778235.1ScaffoldCATOXX000000000SAMEA113581105
GCA_954778075.1ScaffoldCATOXW000000000SAMEA113581106
GCA_954732875.1ScaffoldCATOVV000000000SAMEA113581133
GCA_954725655.1ContigCATOVS000000000SAMEA113581142
GCA_954736725.1ScaffoldCATOVY000000000SAMEA113581109
GCA_954764245.1ScaffoldCATOWC000000000SAMEA113581110
GCA_954737525.1ScaffoldCATOWB000000000SAMEA113581124
GCA_954773185.1ScaffoldCATOWO000000000SAMEA113581116
GCA_954768305.1ScaffoldCATOWJ000000000SAMEA113581113
GCA_954768025.1ScaffoldCATOWE000000000SAMEA113581121
GCA_954767995.1ScaffoldCATOWG000000000SAMEA113581115
GCA_954775475.1ScaffoldCATOXL000000000SAMEA113581128
GCA_954778355.1ContigCATOXQ000000000SAMEA113581139
GCA_954778275.1ScaffoldCATOXO000000000SAMEA113581126
GCA_954779845.1ScaffoldCATOYB000000000SAMEA113581119
GCA_954778435.1ScaffoldCATOXU000000000SAMEA113581117
GCA_954778405.1ContigCATOXP000000000SAMEA113581137
GCA_954773345.1ScaffoldCATOWR000000000SAMEA113581112
GCA_954773875.1ScaffoldCATOWY000000000SAMEA113581122
GCA_954773335.1ScaffoldCATOWV000000000SAMEA113581111
GCA_954774155.1ScaffoldCATOXK000000000SAMEA113581108
GCA_954774135.1ScaffoldCATOXH000000000SAMEA113581134
GCA_954774095.1ScaffoldCATOXE000000000SAMEA113581129
GCA_954773965.1ScaffoldCATOWX000000000SAMEA113581127
GCA_954773955.1ScaffoldCATOXA000000000SAMEA113581114
GCA_954781855.1ScaffoldCATOYN000000000SAMEA113581141
GCA_954780505.1ScaffoldCATOYH000000000SAMEA113581140
GCA_954780715.1ScaffoldCATOYJ000000000SAMEA113581123
GCA_954785605.1ScaffoldCATOYS000000000SAMEA113581120
GCA_954785585.1ScaffoldCATOYR000000000SAMEA113581138
GCA_954785645.1ScaffoldCATOYU000000000SAMEA113581118
GCA_954785725.1ScaffoldCATOYW000000000SAMEA113581125
GCA_954789405.1ScaffoldCATOZA000000000SAMEA113581130
GCA_954789455.1ScaffoldCATOZB000000000SAMEA113581135
GCA_954789315.1ScaffoldCATOZE000000000SAMEA113581136
GCA_954789445.1ScaffoldCATOYY000000000SAMEA113581132
GCA_954789325.1ScaffoldCATOYZ000000000SAMEA113581131

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