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Accession: PRJDB14867 ID: 1036437

Escherichia coli

The investigation of the dissemination of colistin-resistant bacteria in Asia and to develop a simple/rapid detection method that can be used to monitor resistant bacteria

See Genome Information for Escherichia coli
The outcome of this project is demonstrating a scientific basis for implementing public health measures to control the spread of resistant bacteria and infection with antimicrobial-resistant (AMR) bacteria in Japan as well as developing countries including Vietnam, Ecuador and Thailand. More...
AccessionPRJDB14867
Data TypeGenome sequencing
ScopeMultiisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Grants
  • N/A, The Japan Society for the Promotion of Science KAKENHI (20H00561) and the Collaboration Program at ROIS Joint Support-Center for Data Science Research (012RP2021)
SubmissionRegistration date: 6-Nov-2023
The United Graduate School of Drug Discovery and Medical Information Sciences, Gifu University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (Genomic DNA)420
Protein Sequences367289
Other datasets
BioSample78
Assembly78
Assembly details:
Assembly levelNumber of Assemblies
78
78
AssemblyLevelChrsBioSampleStrainTaxonomy
GCA_036493435.1Complete genomeSAMD00562616
15.01CC
GCA_036502665.1Complete genomeSAMD00562614
TBU0218_10-1CC
GCA_036503455.1Complete genomeSAMD00562587
2017.02.04CC
GCA_036503995.1Complete genomeSAMD00562588
2017.03.02CC
GCA_036505855.1Complete genomeSAMD00562605
2017.17.03CC
GCA_036505475.1Complete genomeSAMD00562602
2017.15.02CC
GCA_036506255.1Complete genomeSAMD00562608
2017.18.03CC
GCA_036506055.1Complete genomeSAMD00562607
2017.18.02CC
GCA_036506435.1Complete genomeSAMD00562610
2017.18.04CC
GCA_036506655.1Complete genomeSAMD00562630
2017-19-1CC
GCA_036507355.1Complete genomeSAMD00562579
2018-05-2CC
GCA_036507815.1Complete genomeSAMD00562621
2018-06-4CC
GCA_036506815.1Complete genomeSAMD00562612
2017.20.01CC
GCA_036506995.1Complete genomeSAMD00562620
2018-01-1CC
GCA_036507175.1Complete genomeSAMD00562632
2018-02-2CC
GCA_036508215.1Complete genomeSAMD00562626
2018-10-2CC
GCA_036508015.1Complete genomeSAMD00562582
2018-09-2CC
GCA_036508395.1Complete genomeSAMD00562585
2018-11-1BCC
GCA_036507615.1Complete genomeSAMD00562581
2018-05-5CC
GCA_036504765.1Complete genomeSAMD00562594
2017.06.05CC
GCA_036505675.1Complete genomeSAMD00562603
2017.17.01CC
GCA_036495185.1Complete genomeSAMD00562495
LR-25
GCA_036495405.1Complete genomeSAMD00562507
LR-27
GCA_036495545.1Complete genomeSAMD00562549
LR-28
GCA_036494325.1Complete genomeSAMD00562517
LR-17-1
GCA_036494955.1Complete genomeSAMD00562515
LR-24
GCA_036493855.1Complete genomeSAMD00562502
LR-03
GCA_036494085.1Complete genomeSAMD00562518
LR-13
GCA_036493655.1Complete genomeSAMD00562617
15.03CC
GCA_036499785.1Complete genomeSAMD00562573
PSJ-23
GCA_036499565.1Complete genomeSAMD00562567
PSJ-22
GCA_036499365.1Complete genomeSAMD00562575
PSJ-16
GCA_036499905.1Complete genomeSAMD00562559
PSJ-29
GCA_036500085.1Complete genomeSAMD00562569
PSJ-32-1
GCA_036500285.1Complete genomeSAMD00562561
PSJ-36
GCA_036499205.1Complete genomeSAMD00562563
PSJ-14
GCA_036499005.1Complete genomeSAMD00562571
PSJ-12
GCA_036498805.1Complete genomeSAMD00562577
PSJ-07
GCA_036498665.1Complete genomeSAMD00562557
LR-72
GCA_036498065.1Complete genomeSAMD00562511
LR-64-1
GCA_036498285.1Complete genomeSAMD00562553
LR-64-2
GCA_036498465.1Complete genomeSAMD00562543
LR-71-1
GCA_036497705.1Complete genomeSAMD00562497
LR-60
GCA_036497865.1Complete genomeSAMD00562545
LR-62-2
GCA_036497485.1Complete genomeSAMD00562499
LR-58-2
GCA_036497325.1Complete genomeSAMD00562503
LR-58-1
GCA_036496705.1Complete genomeSAMD00562547
LR-46
GCA_036496865.1Complete genomeSAMD00562555
LR-48
GCA_036497105.1Complete genomeSAMD00562493
LR-51
GCA_036496145.1Complete genomeSAMD00562513
LR-33
GCA_036496485.1Complete genomeSAMD00562509
LR-45
GCA_036495745.1Complete genomeSAMD00562505
LR-29-1
GCA_036496325.1Complete genomeSAMD00562551
LR-41
GCA_036495925.1Complete genomeSAMD00562541
LR-31
GCA_036504915.1Complete genomeSAMD00562596
2017.10.01CC
GCA_036505115.1Complete genomeSAMD00562598
2017.12.01CC
GCA_036505315.1Complete genomeSAMD00562600
2017.13.01CC
GCA_036504575.1Complete genomeSAMD00562592
2017.04.02CC
GCA_036504395.1Complete genomeSAMD00562624
2017-03-3CC
GCA_036504195.1Complete genomeSAMD00562590
2017.03.04CC
GCA_036503815.1Complete genomeSAMD00562628
2017-02-2CC
GCA_036503635.1Complete genomeSAMD00562622
2017-02-1CC
GCA_036502845.1Complete genomeSAMD00562615
TBU0218_11-3CC
GCA_036503025.1Complete genomeSAMD00562619
2017-01-4CC
GCA_036503275.1Complete genomeSAMD00562586
2017.02.03CC
GCA_036502285.1Complete genomeSAMD00562533
PSS-15
GCA_036502505.1Complete genomeSAMD00562537
PSS-16
GCA_036501705.1Complete genomeSAMD00562529
PSS-11
GCA_036501505.1Complete genomeSAMD00562535
PSS-10
GCA_036501905.1Complete genomeSAMD00562525
PSS-12
GCA_036502125.1Complete genomeSAMD00562527
PSS-13
GCA_036500925.1Complete genomeSAMD00562519
PSS-07
GCA_036500485.1Complete genomeSAMD00562565
PSJ-42
GCA_036500705.1Complete genomeSAMD00562521
PSS-04
GCA_036501105.1Complete genomeSAMD00562523
PSS-08-1
GCA_036501305.1Complete genomeSAMD00562531
PSS-08-2
GCA_036562065.1Complete genomeSAMD00562539
LR-18-1
GCA_036494765.1Complete genomeSAMD00562501
LR-21-1

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