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Accession: PRJNA1163300 ID: 1163300

Laminarin stimulates single cell rates of sulfate reduction while oxygen inhibits transcriptomic activity in coastal marine sediment

A vital part of benthic ecology are the chemical cycles carried out by bacteria and archaea living in coastal sediments. More...
AccessionPRJNA1163300
Data TypeGenome sequencing
ScopeMultispecies
SubmissionRegistration date: 20-Sep-2024
Bigelow Laboratory For Ocean Sciences
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)580
SRA Experiments2
Other datasets
BioSample595
Assembly580
Assembly details:
Assembly levelNumber of Assemblies
580
580
AssemblyLevelWGSBioSampleIsolateTaxonomy
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GCA_042570585.1ContigJBHPFP000000000SAMN43845903
SAG AM-311-J22
GCA_042569165.1ContigJBHPIB000000000SAMN43845907
SAG AM-312-D06
GCA_042569465.1ContigJBHPHF000000000SAMN43845906
SAG AM-311-O21
GCA_042568015.1ContigJBHPJC000000000SAMN43845908
SAG AM-312-K21
GCA_042567765.1ContigJBHPJH000000000SAMN43845909
SAG AM-312-M02
GCA_042567125.1ContigJBHPJV000000000SAMN43845911
SAG AM-315-K20
GCA_042567255.1ContigJBHPJM000000000SAMN43845910
SAG AM-312-O05
GCA_042577885.1ContigJBHPDJ000000000SAMN43845896
SAG AM-311-A11
GCA_042577825.1ContigJBHPDO000000000SAMN43845898
SAG AM-311-B11
GCA_042577805.1ContigJBHPDR000000000SAMN43845899
SAG AM-311-B20
GCA_042576525.1ContigJBHPEU000000000SAMN43845901
SAG AM-311-G18
GCA_042576485.1ContigJBHPFB000000000SAMN43845902
SAG AM-311-I11
GCA_042576845.1ContigJBHPEQ000000000SAMN43845900
SAG AM-311-F19
GCA_042577565.1ContigJBHPDL000000000SAMN43845897
SAG AM-311-A17
GCA_042576645.1ContigJBHPEH000000000SAMN43845916
SAG AM-311-E20
GCA_042576625.1ContigJBHPEV000000000SAMN43845918
SAG AM-311-H01
GCA_042576925.1ContigJBHPEO000000000SAMN43845917
SAG AM-311-F14
GCA_042576405.1ContigJBHPFC000000000SAMN43845919
SAG AM-311-I13
GCA_042577645.1ContigJBHPDU000000000SAMN43845915
SAG AM-311-C15
GCA_042567245.1ContigJBHPJZ000000000SAMN43845935
SAG AM-315-N17
GCA_042567105.1ContigJBHPJU000000000SAMN43845934
SAG AM-315-J06
GCA_042567725.1ContigJBHPJO000000000SAMN43845933
SAG AM-312-P01
GCA_042567815.1ContigJBHPJJ000000000SAMN43845932
SAG AM-312-M19
GCA_042568005.1ContigJBHPJG000000000SAMN43845931
SAG AM-312-L20
GCA_042568925.1ContigJBHPIK000000000SAMN43845929
SAG AM-312-F17
GCA_042568885.1ContigJBHPIM000000000SAMN43845930
SAG AM-312-G04
GCA_042570445.1ContigJBHPGQ000000000SAMN43845927
SAG AM-311-N02
GCA_042570885.1ContigJBHPGE000000000SAMN43845925
SAG AM-311-L15
GCA_042570675.1ContigJBHPGM000000000SAMN43845926
SAG AM-311-M13
GCA_042569945.1ContigJBHPGV000000000SAMN43845928
SAG AM-311-N11
GCA_042571505.1ContigJBHPFY000000000SAMN43845923
SAG AM-311-L05
GCA_042571045.1ContigJBHPFZ000000000SAMN43845924
SAG AM-311-L07
GCA_042571685.1ContigJBHPFM000000000SAMN43845922
SAG AM-311-J09
GCA_042572075.1ContigJBHPFH000000000SAMN43845921
SAG AM-311-I23
GCA_042572125.1ContigJBHPFE000000000SAMN43845920
SAG AM-311-I18
GCA_042562225.1ContigJBHPMM000000000SAMN43845940
SAG AM-326-A07
GCA_042563315.1ContigJBHPMR000000000SAMN43845941
SAG AM-326-C16
GCA_042563115.1ContigJBHPLQ000000000SAMN43845939
SAG AM-324-A10
GCA_042562815.1ContigJBHPNB000000000SAMN43845942
SAG AM-326-J07
GCA_042565205.1ContigJBHPKR000000000SAMN43845937
SAG AM-320-N06
GCA_042565375.1ContigJBHPKQ000000000SAMN43845936
SAG AM-320-L16
GCA_042565015.1ContigJBHPKZ000000000SAMN43845938
SAG AM-322-F18
GCA_042569985.1ContigJBHPHB000000000SAMN43845962
SAG AM-311-O03
GCA_042562195.1ContigJBHPNI000000000SAMN43845963
SAG AM-326-O08
GCA_042572525.1ContigJBHPCW000000000SAMN43845409
SAG AM-311-L17
GCA_042567515.1ContigJBHPJP000000000SAMN43845703
SAG AM-312-P02
GCA_042567335.1ContigJBHPJX000000000SAMN43845704
SAG AM-315-M14
GCA_042567345.1ContigJBHPJY000000000SAMN43845705
SAG AM-315-M17
GCA_042576125.1ContigJBHPCH000000000SAMN43845394
SAG AM-311-B10
GCA_042576065.1ContigJBHPCK000000000SAMN43845397
SAG AM-311-C17
GCA_042576045.1ContigJBHPCL000000000SAMN43845398
SAG AM-311-D22
GCA_042576025.1ContigJBHPCG000000000SAMN43845393
SAG AM-311-B03
GCA_042576005.1ContigJBHPCO000000000SAMN43845401
SAG AM-311-E16
GCA_042575925.1ContigJBHPCF000000000SAMN43845392
SAG AM-311-A05
GCA_042572595.1ContigJBHPCQ000000000SAMN43845403
SAG AM-311-E23
GCA_042573305.1ContigJBHPDF000000000SAMN43845418
SAG AM-312-B17
GCA_042573405.1ContigJBHPDB000000000SAMN43845414
SAG AM-311-N13
GCA_042573355.1ContigJBHPDD000000000SAMN43845416
SAG AM-311-O09
GCA_042573485.1ContigJBHPCX000000000SAMN43845410
SAG AM-311-L20
GCA_042573565.1ContigJBHPDA000000000SAMN43845413
SAG AM-311-N04
GCA_042573385.1ContigJBHPDC000000000SAMN43845415
SAG AM-311-O04
GCA_042573375.1ContigJBHPDE000000000SAMN43845417
SAG AM-311-P20
GCA_042573625.1ContigJBHPCZ000000000SAMN43845412
SAG AM-311-M20
GCA_042573595.1ContigJBHPCR000000000SAMN43845404
SAG AM-311-F15
GCA_042574765.1ContigJBHPCS000000000SAMN43845405
SAG AM-311-G02
GCA_042574825.1ContigJBHPCU000000000SAMN43845407
SAG AM-311-I14
GCA_042574865.1ContigJBHPCV000000000SAMN43845408
SAG AM-311-J08
GCA_042574985.1ContigJBHPCJ000000000SAMN43845396
SAG AM-311-C09
GCA_042574945.1ContigJBHPCN000000000SAMN43845400
SAG AM-311-E04
GCA_042574885.1ContigJBHPCY000000000SAMN43845411
SAG AM-311-M10
GCA_042575025.1ContigJBHPCP000000000SAMN43845402
SAG AM-311-E21
GCA_042575005.1ContigJBHPCT000000000SAMN43845406
SAG AM-311-I02
GCA_042575825.1ContigJBHPCI000000000SAMN43845395
SAG AM-311-C03
GCA_042575085.1ContigJBHPCM000000000SAMN43845399
SAG AM-311-E02
GCA_042562395.1ContigJBHPMB000000000SAMN43845708
SAG AM-324-I20
GCA_042562785.1ContigJBHPMA000000000SAMN43845707
SAG AM-324-I17
GCA_042563105.1ContigJBHPMD000000000SAMN43845709
SAG AM-324-K05
GCA_042563635.1ContigJBHPMP000000000SAMN43845711
SAG AM-326-C02
GCA_042563435.1ContigJBHPMT000000000SAMN43845712
SAG AM-326-D06
GCA_042563835.1ContigJBHPMN000000000SAMN43845710
SAG AM-326-B05
GCA_042566255.1ContigJBHPKI000000000SAMN43845706
SAG AM-320-F06
GCA_042565105.1ContigJBHPNC000000000SAMN43845713
SAG AM-326-J23
GCA_042767745.1ContigJBHPHL000000000SAMN43845967
SAG AM-311-P16
GCA_042566045.1ContigJBHORF000000000SAMN43883043
SAG AM-311-K05
GCA_042565955.1ContigJBHORG000000000SAMN43883044
SAG AM-311-L02
GCA_042576685.1ContigJBHPEX000000000SAMN43845969
SAG AM-311-H24
GCA_042577465.1ContigJBHPEB000000000SAMN43845968
SAG AM-311-D18
GCA_042565945.1ContigJBHORN000000000SAMN43883051
SAG AM-312-L22
GCA_042566005.1ContigJBHORO000000000SAMN43883052
SAG AM-312-P09
GCA_042565765.1ContigJBHORL000000000SAMN43883049
SAG AM-311-O06
GCA_042565725.1ContigJBHORK000000000SAMN43883048
SAG AM-311-M03
GCA_042566185.1ContigJBHORP000000000SAMN43883053
SAG AM-324-B15
GCA_042566015.1ContigJBHORM000000000SAMN43883050
SAG AM-311-P06
GCA_042584585.1ContigJBHOSQ000000000SAMN43845143
SAG AM-311-L14
GCA_042566775.1ContigJBHPKG000000000SAMN43845943
SAG AM-320-E02
GCA_042566505.1ContigJBHPKP000000000SAMN43845946
SAG AM-320-J04
GCA_042565665.1ContigJBHORI000000000SAMN43883046
SAG AM-326-O21
GCA_042564265.1ContigJBHPLK000000000SAMN43845947
SAG AM-322-L15
GCA_042563815.1ContigJBHPMO000000000SAMN43845949
SAG AM-326-B16
GCA_042563805.1ContigJBHPME000000000SAMN43845948
SAG AM-324-K08
GCA_042562835.1ContigJBHPNA000000000SAMN43845944
SAG AM-326-I19
GCA_042576305.1ContigJBHPBY000000000SAMN43845385
SAG AM-311-K15
SRA Data Details
ParameterValue
Data volume, Gbases25
Data volume, Mbytes8225

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