ID 845100 - BioProject

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Accession: PRJNA845100 ID: 845100

Evolution and transmission of Mycobacterium tuberculosis in North-east India

To study genomic features of Mycobacterium tuberculosis isolates from India to better understand the drug resistance phenotype and genomic evolution of the Mycobacterium strain

Accession	PRJNA845100
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 3-Jun-2022 AIIMS, New Delhi
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	55
Other datasets
BioSample	56
Assembly	55

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

55
55

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_031626215.1	JAMQFM000000000	SAMN28856312	Hos50	Mycobacterium intracellulare
GCA_042862255.1	JAVHKU000000000	SAMN37032507	HOS05	Mycobacterium sp. HOS05
GCA_042862245.1	JAVHKT000000000	SAMN37032509	HOS105	Mycobacterium sp. HOS105
GCA_042862225.1	JAVHKS000000000	SAMN37032510	HOS111	Mycobacterium sp. HOS111
GCA_042862145.1	JAVHKR000000000	SAMN37032511	HOS125	Mycobacterium sp. HOS125
GCA_042862175.1	JAVHKQ000000000	SAMN37032512	HOS129	Mycobacterium sp. HOS129
GCA_042862155.1	JAVHKP000000000	SAMN37032513	HOS204	Mycobacterium sp. HOS204
GCA_042954605.1	JAVFWT000000000	SAMN37032514	HOS206	Mycobacterium sp. HOS206
GCA_042862165.1	JAVHKO000000000	SAMN37032515	HOS39	Mycobacterium sp. HOS39
GCA_042862455.1	JAVHKN000000000	SAMN37032516	HOS41	Mycobacterium sp. HOS41
GCA_042862095.1	JAVHKM000000000	SAMN37032517	HOS42	Mycobacterium sp. HOS42
GCA_042862085.1	JAVHKL000000000	SAMN37032518	HOS47	Mycobacterium sp. HOS47
GCA_042862075.1	JAVHKK000000000	SAMN37032519	HOS52	Mycobacterium sp. HOS52
GCA_042862065.1	JAVHKJ000000000	SAMN37032520	HOS53	Mycobacterium sp. HOS53
GCA_042862025.1	JAVHKI000000000	SAMN37032521	HOS82	Mycobacterium sp. HOS82
GCA_042862035.1	JAVHKH000000000	SAMN37032522	HOS86	Mycobacterium sp. HOS86
GCA_042861965.1	JAVHKG000000000	SAMN37032523	HOS88	Mycobacterium sp. HOS88
GCA_032873335.2	JAMQFC000000000	SAMN28856302	Hos15	Mycobacterium tuberculosis
GCA_031626235.1	JAMQFJ000000000	SAMN28856309	Hos46	Mycobacterium tuberculosis
GCA_031626135.1	JAMQFL000000000	SAMN28856311	Hos49	Mycobacterium tuberculosis
GCA_031626115.1	JAMQFN000000000	SAMN28856313	Hos51	Mycobacterium tuberculosis
GCA_031625995.1	JAMQFP000000000	SAMN28856315	Hos64	Mycobacterium tuberculosis
GCA_031625945.1	JAMQFQ000000000	SAMN28856316	Hos67	Mycobacterium tuberculosis
GCA_031625935.1	JAMQFT000000000	SAMN28856319	Hos89	Mycobacterium tuberculosis
GCA_031625795.1	JAMQFU000000000	SAMN28856320	Hos90	Mycobacterium tuberculosis
GCA_031625875.1	JAMQFS000000000	SAMN28856318	Hos78	Mycobacterium tuberculosis
GCA_031625885.1	JAMQFR000000000	SAMN28856317	Hos68	Mycobacterium tuberculosis
GCA_031626195.1	JAMQFK000000000	SAMN28856310	Hos48	Mycobacterium tuberculosis
GCA_031626055.1	JAMQFO000000000	SAMN28856314	Hos57	Mycobacterium tuberculosis
GCA_031625495.1	JAMQGB000000000	SAMN28856327	Hos113	Mycobacterium tuberculosis
GCA_031625445.1	JAMQGE000000000	SAMN28856330	Hos117	Mycobacterium tuberculosis
GCA_031625435.1	JAMQGD000000000	SAMN28856329	Hos116	Mycobacterium tuberculosis
GCA_031625455.1	JAMQGC000000000	SAMN28856328	Hos115	Mycobacterium tuberculosis
GCA_031625315.1	JAMQGH000000000	SAMN28856333	Hos122	Mycobacterium tuberculosis
GCA_031625275.1	JAMQGJ000000000	SAMN28856335	Hos124	Mycobacterium tuberculosis
GCA_031625265.1	JAMQGG000000000	SAMN28856332	Hos121	Mycobacterium tuberculosis
GCA_031625255.1	JAMQGF000000000	SAMN28856331	Hos118	Mycobacterium tuberculosis
GCA_031625635.1	JAMQFY000000000	SAMN28856324	Hos104	Mycobacterium tuberculosis
GCA_031625645.1	JAMQFW000000000	SAMN28856322	Hos102	Mycobacterium tuberculosis
GCA_031625745.1	JAMQFV000000000	SAMN28856321	Hos101	Mycobacterium tuberculosis
GCA_031625775.1	JAMQFZ000000000	SAMN28856325	Hos107	Mycobacterium tuberculosis
GCA_031626455.1	JAMQEY000000000	SAMN28856298	Hos03	Mycobacterium tuberculosis
GCA_031626435.1	JAMQEZ000000000	SAMN28856299	Hos06	Mycobacterium tuberculosis
GCA_031626415.1	JAMQFA000000000	SAMN28856300	Hos11	Mycobacterium tuberculosis
GCA_031626375.1	JAMQFD000000000	SAMN28856303	Hos18	Mycobacterium tuberculosis
GCA_031626395.1	JAMQFB000000000	SAMN28856301	Hos14	Mycobacterium tuberculosis
GCA_031626355.1	JAMQFG000000000	SAMN28856306	Hos36	Mycobacterium tuberculosis
GCA_031626325.1	JAMQFE000000000	SAMN28856304	Hos29	Mycobacterium tuberculosis
GCA_031626315.1	JAMQFF000000000	SAMN28856305	Hos30	Mycobacterium tuberculosis
GCA_031626295.1	JAMQFH000000000	SAMN28856307	Hos38	Mycobacterium tuberculosis
GCA_031626275.1	JAMQFI000000000	SAMN28856308	Hos45	Mycobacterium tuberculosis
GCA_031625605.1	JAMQFX000000000	SAMN28856323	Hos103	Mycobacterium tuberculosis
GCA_031625515.1	JAMQGA000000000	SAMN28856326	Hos108	Mycobacterium tuberculosis
GCA_031624695.1	JAMQGI000000000	SAMN28856334	Hos123	Mycobacterium tuberculosis
GCA_031624675.1	JAMQGK000000000	SAMN28856336	Hos126	Mycobacterium tuberculosis

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Evolution and transmission of Mycobacterium tuberculosis in North-east India

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