Soil (ID 1160830) - BioProject

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Accession: PRJNA1160830 ID: 1160830

Soil

Metagenomes and Metagenome-Assembled genomes from agricultural soils under Managed Aquifer Recharge

Managed Aquifer Recharge (MAR) systems play a vital role in replenishing groundwater aquifers, yet the functional diversity of soil microbiomes at varying depths in agricultural soils used for MAR remains largely unexplored. More...

Accession	PRJNA1160830
Data Type	Genome sequencing
Scope	Environment
Organism	soil metagenome[Taxonomy ID: 410658] unclassified sequences; metagenomes; ecological metagenomes; soil metagenome
Submission	Registration date: 13-Sep-2024 University of California Davis
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	160
SRA Experiments	36
Other datasets
BioSample	196
Assembly	160

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

160
160

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_044871175.1	JBIOZN000000000	SAMN43785814	MAG003	Acidimicrobiales bacterium
GCA_044870155.1	JBIOYN000000000	SAMN43785840	MAG029	Acidimicrobiia bacterium
GCA_044870055.1	JBIOYG000000000	SAMN43785847	MAG036	Acidimicrobiia bacterium
GCA_044869025.1	JBIOWY000000000	SAMN43785881	MAG070	Acidimicrobiia bacterium
GCA_044867525.1	JBIOVB000000000	SAMN43785930	MAG119	Acidimicrobiia bacterium
GCA_044867425.1	JBIOUX000000000	SAMN43785934	MAG123	Acidimicrobiia bacterium
GCA_044866705.1	JBIOUE000000000	SAMN43785953	MAG142	Acidimicrobiia bacterium
GCA_044866285.1	JBIOTU000000000	SAMN43785963	MAG152	Acidimicrobiia bacterium
GCA_044868305.1	JBIOWH000000000	SAMN43785898	MAG087	Actinomycetes bacterium
GCA_044870185.1	JBIOYL000000000	SAMN43785842	MAG031	Actinomycetes bacterium
GCA_044869895.1	JBIOXZ000000000	SAMN43785854	MAG043	Actinomycetota bacterium
GCA_044870295.1	JBIOYQ000000000	SAMN43785837	MAG026	Actinomycetota bacterium
GCA_044868775.1	JBIOWR000000000	SAMN43785888	MAG077	Actinomycetota bacterium
GCA_044869185.1	JBIOXA000000000	SAMN43785879	MAG068	Actinomycetota bacterium
GCA_044866075.1	JBIOTQ000000000	SAMN43785967	MAG156	Actinomycetota bacterium
GCA_044865955.1	JBIOTM000000000	SAMN43785971	MAG160	Actinomycetota bacterium
GCA_044867405.1	JBIOUW000000000	SAMN43785935	MAG124	Actinomycetota bacterium
GCA_044867345.1	JBIOUU000000000	SAMN43785937	MAG126	Actinomycetota bacterium
GCA_044868645.1	JBIOWL000000000	SAMN43785894	MAG083	Aestuariivirga sp.
GCA_044869835.1	JBIOXW000000000	SAMN43785857	MAG046	Aestuariivirga sp.
GCA_044870245.1	JBIOYR000000000	SAMN43785836	MAG025	Aestuariivirgaceae bacterium
GCA_044867715.1	JBIOVL000000000	SAMN43785920	MAG109	Aestuariivirgaceae bacterium
GCA_044866555.1	JBIOUC000000000	SAMN43785955	MAG144	Aestuariivirgaceae bacterium
GCA_044867595.1	JBIOVF000000000	SAMN43785926	MAG115	Allorhizocola sp.
GCA_044868715.1	JBIOWQ000000000	SAMN43785889	MAG078	Allorhizocola sp.
GCA_044869915.1	JBIOYB000000000	SAMN43785852	MAG041	Allorhizocola sp.
GCA_044869965.1	JBIOXY000000000	SAMN43785855	MAG044	Blastocatellia bacterium
GCA_044868105.1	JBIOWC000000000	SAMN43785903	MAG092	Blastocatellia bacterium
GCA_044870635.1	JBIOZB000000000	SAMN43785826	MAG015	Burkholderiaceae bacterium
GCA_044871145.1	JBIOZM000000000	SAMN43785815	MAG004	Burkholderiales bacterium
GCA_044870335.1	JBIOYV000000000	SAMN43785832	MAG021	Burkholderiales bacterium
GCA_044867805.1	JBIOVQ000000000	SAMN43785915	MAG104	Burkholderiales bacterium
GCA_044866855.1	JBIOUI000000000	SAMN43785949	MAG138	Burkholderiales bacterium
GCA_044869705.1	JBIOXP000000000	SAMN43785864	MAG053	Candidatus Binatia bacterium
GCA_044867365.1	JBIOUT000000000	SAMN43785938	MAG127	Candidatus Eisenbacteria bacterium
GCA_044869125.1	JBIOWZ000000000	SAMN43785880	MAG069	Candidatus Krumholzibacteriia bacterium
GCA_044870345.1	JBIOYS000000000	SAMN43785835	MAG024	Candidatus Krumholzibacteriia bacterium
GCA_044870705.1	JBIOYZ000000000	SAMN43785828	MAG017	Candidatus Limnocylindrales bacterium
GCA_044869605.1	JBIOXL000000000	SAMN43785868	MAG057	Candidatus Limnocylindrales bacterium
GCA_044870045.1	JBIOYH000000000	SAMN43785846	MAG035	Candidatus Limnocylindrales bacterium
GCA_044868045.1	JBIOWA000000000	SAMN43785905	MAG094	Candidatus Limnocylindrales bacterium
GCA_044867505.1	JBIOVD000000000	SAMN43785928	MAG117	Candidatus Limnocylindria bacterium
GCA_044866725.1	JBIOUD000000000	SAMN43785954	MAG143	Candidatus Limnocylindria bacterium
GCA_044866355.1	JBIOTW000000000	SAMN43785961	MAG150	Candidatus Limnocylindria bacterium
GCA_044868745.1	JBIOWS000000000	SAMN43785887	MAG076	Candidatus Polarisedimenticolia bacterium
GCA_044868535.1	JBIOWK000000000	SAMN43785895	MAG084	Candidatus Rokuibacteriota bacterium
GCA_044867785.1	JBIOVM000000000	SAMN43785919	MAG108	Candidatus Rokuibacteriota bacterium
GCA_044867585.1	JBIOVG000000000	SAMN43785925	MAG114	Candidatus Rokuibacteriota bacterium
GCA_044870165.1	JBIOYM000000000	SAMN43785841	MAG030	Candidatus Rokuibacteriota bacterium
GCA_044869815.1	JBIOXS000000000	SAMN43785861	MAG050	Candidatus Rokuibacteriota bacterium
GCA_044866005.1	JBIOTN000000000	SAMN43785970	MAG159	Candidatus Rokuibacteriota bacterium
GCA_044869775.1	JBIOXU000000000	SAMN43785859	MAG048	Candidatus Udaeobacter sp.
GCA_044867565.1	JBIOVE000000000	SAMN43785927	MAG116	Candidatus Udaeobacter sp.
GCA_044866205.1	JBIOTV000000000	SAMN43785962	MAG151	Candidatus Udaeobacter sp.
GCA_044870015.1	JBIOYE000000000	SAMN43785849	MAG038	Candidatus Zixiibacteriota bacterium
GCA_044867875.1	JBIOVR000000000	SAMN43785914	MAG103	Chitinophagaceae bacterium
GCA_044869735.1	JBIOXR000000000	SAMN43785862	MAG051	Chlamydiales bacterium
GCA_044870035.1	JBIOYF000000000	SAMN43785848	MAG037	Dehalococcoidia bacterium
GCA_044867305.1	JBIOUP000000000	SAMN43785942	MAG131	Dermatophilaceae bacterium
GCA_044871235.1	JBIOZL000000000	SAMN43785816	MAG005	Gaiella sp.
GCA_044871215.1	JBIOZO000000000	SAMN43785813	MAG002	Gaiellaceae bacterium
GCA_044870105.1	JBIOYJ000000000	SAMN43785844	MAG033	Gaiellaceae bacterium
GCA_044868175.1	JBIOWD000000000	SAMN43785902	MAG091	Gaiellaceae bacterium
GCA_044869695.1	JBIOXO000000000	SAMN43785865	MAG054	Gaiellales bacterium
GCA_044870605.1	JBIOZC000000000	SAMN43785825	MAG014	Gaiellales bacterium
GCA_044870595.1	JBIOZA000000000	SAMN43785827	MAG016	Gemmatimonadales bacterium
GCA_044869375.1	JBIOXF000000000	SAMN43785874	MAG063	Gemmatimonadales bacterium
GCA_044869265.1	JBIOXD000000000	SAMN43785876	MAG065	Gemmatimonadales bacterium
GCA_044867445.1	JBIOUY000000000	SAMN43785933	MAG122	Gemmatimonadales bacterium
GCA_044866195.1	JBIOTT000000000	SAMN43785964	MAG153	Gemmatimonadales bacterium
GCA_044866105.1	JBIOTS000000000	SAMN43785965	MAG154	Gemmatimonadales bacterium
GCA_044867545.1	JBIOVC000000000	SAMN43785929	MAG118	Hyphomicrobiaceae bacterium
GCA_044868325.1	JBIOWI000000000	SAMN43785897	MAG086	Hyphomicrobiaceae bacterium
GCA_044870135.1	JBIOYK000000000	SAMN43785843	MAG032	Hyphomicrobiaceae bacterium
GCA_044869925.1	JBIOYA000000000	SAMN43785853	MAG042	Hyphomicrobiaceae bacterium
GCA_044870695.1	JBIOZD000000000	SAMN43785824	MAG013	Ilumatobacteraceae bacterium
GCA_044869475.1	JBIOXI000000000	SAMN43785871	MAG060	Ilumatobacteraceae bacterium
GCA_044867195.1	JBIOUO000000000	SAMN43785943	MAG132	Ilumatobacteraceae bacterium
GCA_044867905.1	JBIOVU000000000	SAMN43785911	MAG100	Ilumatobacteraceae bacterium
GCA_044868555.1	JBIOWO000000000	SAMN43785891	MAG080	Lacipirellulaceae bacterium
GCA_044867485.1	JBIOVA000000000	SAMN43785931	MAG120	Lacipirellulaceae bacterium
GCA_044868295.1	JBIOWF000000000	SAMN43785900	MAG089	Microtetraspora sp.
GCA_044867945.1	JBIOVW000000000	SAMN43785909	MAG098	Nakamurella sp.
GCA_044870355.1	JBIOYX000000000	SAMN43785830	MAG019	Nitrososphaeraceae archaeon
GCA_044870765.1	JBIOZG000000000	SAMN43785821	MAG010	Nitrososphaeraceae archaeon
GCA_044870745.1	JBIOZE000000000	SAMN43785823	MAG012	Nitrososphaeraceae archaeon
GCA_044870935.1	JBIOZJ000000000	SAMN43785818	MAG007	Nitrososphaeraceae archaeon
GCA_044869655.1	JBIOXM000000000	SAMN43785867	MAG056	Nitrososphaeraceae archaeon
GCA_044867985.1	JBIOVZ000000000	SAMN43785906	MAG095	Nitrososphaeraceae archaeon
GCA_044868465.1	JBIOWM000000000	SAMN43785893	MAG082	Nitrososphaeraceae archaeon
GCA_044868985.1	JBIOWV000000000	SAMN43785884	MAG073	Nitrososphaeraceae archaeon
GCA_044867865.1	JBIOVT000000000	SAMN43785912	MAG101	Nitrososphaeraceae archaeon
GCA_044867465.1	JBIOUZ000000000	SAMN43785932	MAG121	Nitrososphaeraceae archaeon
GCA_044867125.1	JBIOUM000000000	SAMN43785945	MAG134	Nitrososphaeraceae archaeon
GCA_044867615.1	JBIOVH000000000	SAMN43785924	MAG113	Nitrososphaeraceae archaeon
GCA_044866435.1	JBIOUA000000000	SAMN43785957	MAG146	Nitrososphaeraceae archaeon
GCA_044865935.1	JBIOTR000000000	SAMN43785966	MAG155	Nitrososphaeraceae archaeon
GCA_044869255.1	JBIOXC000000000	SAMN43785877	MAG066	Nitrospira sp.
GCA_044868335.1	JBIOWJ000000000	SAMN43785896	MAG085	Nocardioidaceae bacterium
GCA_044868885.1	JBIOWT000000000	SAMN43785886	MAG075	Nocardioidaceae bacterium
GCA_044866695.1	JBIOUF000000000	SAMN43785952	MAG141	Nocardioidaceae bacterium
GCA_044869625.1	JBIOXJ000000000	SAMN43785870	MAG059	Nocardioidaceae bacterium
GCA_044870235.1	JBIOYP000000000	SAMN43785838	MAG027	Nocardioidaceae bacterium
GCA_044870175.1	JBIOYO000000000	SAMN43785839	MAG028	Nocardioidaceae bacterium
GCA_044870915.1	JBIOZF000000000	SAMN43785822	MAG011	Nocardioidaceae bacterium
GCA_044867745.1	JBIOVN000000000	SAMN43785918	MAG107	Nocardioides sp.
GCA_044868145.1	JBIOWE000000000	SAMN43785901	MAG090	Patescibacteria group bacterium
GCA_044868945.1	JBIOWX000000000	SAMN43785882	MAG071	Polyangiales bacterium
GCA_044870975.1	JBIOZK000000000	SAMN43785817	MAG006	Pyrinomonadaceae bacterium
GCA_044870475.1	JBIOYY000000000	SAMN43785829	MAG018	Pyrinomonadaceae bacterium
GCA_044867735.1	JBIOVO000000000	SAMN43785917	MAG106	Pyrinomonadaceae bacterium
GCA_044866445.1	JBIOTY000000000	SAMN43785959	MAG148	Pyrinomonadaceae bacterium
GCA_044867655.1	JBIOVJ000000000	SAMN43785922	MAG111	Pyrinomonadaceae bacterium
GCA_044867025.1	JBIOUJ000000000	SAMN43785948	MAG137	Pyrinomonadaceae bacterium
GCA_044867035.1	JBIOUL000000000	SAMN43785946	MAG135	Pyrinomonadaceae bacterium
GCA_044869575.1	JBIOXH000000000	SAMN43785872	MAG061	Rhodospirillales bacterium
GCA_044865965.1	JBIOTP000000000	SAMN43785968	MAG157	Solirubrobacteraceae bacterium
GCA_044871225.1	JBIOZP000000000	SAMN43785812	MAG001	Solirubrobacterales bacterium
GCA_044869675.1	JBIOXN000000000	SAMN43785866	MAG055	Solirubrobacterales bacterium
GCA_044867285.1	JBIOUR000000000	SAMN43785940	MAG129	Solirubrobacterales bacterium
GCA_044867245.1	JBIOUQ000000000	SAMN43785941	MAG130	Solirubrobacterales bacterium
GCA_044867645.1	JBIOVI000000000	SAMN43785923	MAG112	Solirubrobacterales bacterium
GCA_044866505.1	JBIOTZ000000000	SAMN43785958	MAG147	Solirubrobacterales bacterium
GCA_044865945.1	JBIOTO000000000	SAMN43785969	MAG158	Solirubrobacterales bacterium
GCA_044867815.1	JBIOVP000000000	SAMN43785916	MAG105	Solirubrobacterales bacterium
GCA_044869385.1	JBIOXE000000000	SAMN43785875	MAG064	Solirubrobacterales bacterium
GCA_044868125.1	JBIOWB000000000	SAMN43785904	MAG093	Solirubrobacterales bacterium
GCA_044867965.1	JBIOVY000000000	SAMN43785907	MAG096	Solirubrobacterales bacterium
GCA_044867925.1	JBIOVV000000000	SAMN43785910	MAG099	Solirubrobacterales bacterium
GCA_044869445.1	JBIOXG000000000	SAMN43785873	MAG062	Steroidobacteraceae bacterium
GCA_044868955.1	JBIOWW000000000	SAMN43785883	MAG072	Steroidobacteraceae bacterium
GCA_044867845.1	JBIOVS000000000	SAMN43785913	MAG102	Steroidobacteraceae bacterium
GCA_044866955.1	JBIOUH000000000	SAMN43785950	MAG139	Steroidobacteraceae bacterium
GCA_044866945.1	JBIOUK000000000	SAMN43785947	MAG136	Steroidobacteraceae bacterium
GCA_044869725.1	JBIOXQ000000000	SAMN43785863	MAG052	Steroidobacteraceae bacterium
GCA_044870925.1	JBIOZH000000000	SAMN43785820	MAG009	Steroidobacteraceae bacterium
GCA_044871085.1	JBIOZI000000000	SAMN43785819	MAG008	Steroidobacteraceae bacterium
GCA_044870375.1	JBIOYW000000000	SAMN43785831	MAG020	Steroidobacteraceae bacterium
GCA_044867665.1	JBIOVK000000000	SAMN43785921	MAG110	Thermoanaerobaculia bacterium
GCA_044868925.1	JBIOWU000000000	SAMN43785885	MAG074	Thermoanaerobaculia bacterium
GCA_044868005.1	JBIOVX000000000	SAMN43785908	MAG097	Thermoanaerobaculia bacterium
GCA_044868515.1	JBIOWN000000000	SAMN43785892	MAG081	Thermoanaerobaculia bacterium
GCA_044868285.1	JBIOWG000000000	SAMN43785899	MAG088	Thermoanaerobaculia bacterium
GCA_044866565.1	JBIOUB000000000	SAMN43785956	MAG145	Thermoanaerobaculia bacterium
GCA_044866315.1	JBIOTX000000000	SAMN43785960	MAG149	Thermoanaerobaculia bacterium
GCA_044866775.1	JBIOUG000000000	SAMN43785951	MAG140	Thermoanaerobaculia bacterium
GCA_044867135.1	JBIOUN000000000	SAMN43785944	MAG133	Thermoanaerobaculia bacterium
GCA_044869805.1	JBIOXV000000000	SAMN43785858	MAG047	Thermoanaerobaculia bacterium
GCA_044869955.1	JBIOYC000000000	SAMN43785851	MAG040	Thermoanaerobaculia bacterium
GCA_044869585.1	JBIOXK000000000	SAMN43785869	MAG058	Thermoanaerobaculia bacterium
GCA_044870315.1	JBIOYU000000000	SAMN43785833	MAG022	Thermoanaerobaculia bacterium
GCA_044870275.1	JBIOYT000000000	SAMN43785834	MAG023	Thermoanaerobaculia bacterium
GCA_044867325.1	JBIOUS000000000	SAMN43785939	MAG128	Thermoleophilaceae bacterium
GCA_044869995.1	JBIOYD000000000	SAMN43785850	MAG039	Xanthobacteraceae bacterium
GCA_044870075.1	JBIOYI000000000	SAMN43785845	MAG034	bacterium
GCA_044869795.1	JBIOXT000000000	SAMN43785860	MAG049	bacterium
GCA_044869875.1	JBIOXX000000000	SAMN43785856	MAG045	bacterium
GCA_044867385.1	JBIOUV000000000	SAMN43785936	MAG125	bacterium
GCA_044868695.1	JBIOWP000000000	SAMN43785890	MAG079	bacterium
GCA_044869275.1	JBIOXB000000000	SAMN43785878	MAG067	bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	652
Data volume, Tbytes	0.21

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Soil

Metagenomes and Metagenome-Assembled genomes from agricultural soils under Managed Aquifer Recharge

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