ID 1187981 - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from Nucleotide

Accession: PRJEB82468 ID: 1187981

Metagenome assembly of PRJEB63360 data set (The workers’ microbiomes are the main route of dispersion of antimicrobial resistance from the food system to the human local population.)

The Third Party Annotation (TPA) assembly was derived from the primary data set PRJEB63360

Accession	PRJEB82468
Data Type	Genome sequencing
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Richardson L et al., "MGnify: the microbiome sequence data analysis resource in 2023.", Nucleic Acids Res, 2023 Jan 6;51(D1):D753-D759
Submission	Registration date: 19-Nov-2024 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	19576
WGS master	139
Publications
PubMed	1
PMC	1
Other datasets
BioSample	139
Assembly	139

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

139
139

Assembly	WGS	BioSample	Taxonomy
GCA_964379485.1	CAYKSL000000000	SAMEA117401664	Acinetobacter indicus
GCA_964379445.1	CAYKSF000000000	SAMEA117401657	Akkermansia muciniphila
GCA_964380185.1	CAYKUX000000000	SAMEA117401652	Alistipes communis
GCA_964379795.1	CAYKTK000000000	SAMEA117401655	Alistipes finegoldii
GCA_964379675.1	CAYKTC000000000	SAMEA117401604	Bacteroides fragilis
GCA_964379015.1	CAYKQG000000000	SAMEA117401580	Bacteroides fragilis
GCA_964380195.1	CAYKUY000000000	SAMEA117401649	Bacteroides uniformis
GCA_964379605.1	CAYKRZ000000000	SAMEA117401590	Barnesiella intestinihominis
GCA_964379845.1	CAYKTB000000000	SAMEA117401618	Bifidobacterium pullorum
GCA_964379985.1	CAYKUB000000000	SAMEA117401556	Brevibacterium epidermidis
GCA_964379025.1	CAYKQL000000000	SAMEA117401603	Candidatus Agathobaculum intestinigallinarum
GCA_964379565.1	CAYKSM000000000	SAMEA117401654	Candidatus Agathobaculum intestinipullorum
GCA_964378765.1	CAYKPX000000000	SAMEA117401615	Candidatus Agathobaculum merdipullorum
GCA_964379745.1	CAYKSW000000000	SAMEA117401646	Candidatus Alistipes intestinigallinarum
GCA_964379505.1	CAYKSS000000000	SAMEA117401642	Candidatus Anaerofilum excrementigallinarum
GCA_964379635.1	CAYKSZ000000000	SAMEA117401633	Candidatus Anaerofilum faecale
GCA_964379055.1	CAYKQW000000000	SAMEA117401592	Candidatus Avoscillospira stercoripullorum
GCA_964380345.1	CAYKVK000000000	SAMEA117401548	Candidatus Caccoplasma merdipullorum
GCA_964380285.1	CAYKVJ000000000	SAMEA117401542	Candidatus Caccousia avicola
GCA_964380115.1	CAYKUK000000000	SAMEA117401578	Candidatus Eisenbergiella merdavium
GCA_964379165.1	CAYKQS000000000	SAMEA117401588	Candidatus Eisenbergiella merdigallinarum
GCA_964379775.1	CAYKTL000000000	SAMEA117401561	Candidatus Faecivivens stercorigallinarum
GCA_964379625.1	CAYKSQ000000000	SAMEA117401559	Candidatus Faecousia excrementipullorum
GCA_964380005.1	CAYKUH000000000	SAMEA117401638	Candidatus Faecousia excrementipullorum
GCA_964380055.1	CAYKUF000000000	SAMEA117401640	Candidatus Faecousia excrementipullorum
GCA_964379595.1	CAYKTF000000000	SAMEA117401636	Candidatus Faecousia faecavium
GCA_964380125.1	CAYKUL000000000	SAMEA117401571	Candidatus Gallimonas merdigallinarum
GCA_964379045.1	CAYKQV000000000	SAMEA117401586	Candidatus Gemmiger stercoripullorum
GCA_964379785.1	CAYKSU000000000	SAMEA117401594	Candidatus Helicobacter avistercoris
GCA_964379515.1	CAYKSI000000000	SAMEA117401622	Candidatus Helicobacter avistercoris
GCA_964379405.1	CAYKSJ000000000	SAMEA117401533	Candidatus Lachnoclostridium stercoravium
GCA_964378955.1	CAYKQB000000000	SAMEA117401563	Candidatus Lachnoclostridium stercoripullorum
GCA_964379245.1	CAYKRE000000000	SAMEA117401644	Candidatus Limihabitans stercoravium
GCA_964379305.1	CAYKRP000000000	SAMEA117401658	Candidatus Luteimonas excrementigallinarum
GCA_964380155.1	CAYKUR000000000	SAMEA117401620	Candidatus Mediterraneibacter gallistercoris
GCA_964379005.1	CAYKQP000000000	SAMEA117401619	Candidatus Mediterraneibacter pullicola
GCA_964379075.1	CAYKQR000000000	SAMEA117401606	Candidatus Mediterraneibacter stercorigallinarum
GCA_964379695.1	CAYKTN000000000	SAMEA117401628	Candidatus Merdivicinus intestinavium
GCA_964378705.1	CAYKPE000000000	SAMEA117401549	Candidatus Rikenella faecigallinarum
GCA_964380215.1	CAYKUW000000000	SAMEA117401526	Clostridium perfringens
GCA_964379865.1	CAYKTJ000000000	SAMEA117401525	Enterobacter cloacae
GCA_964380265.1	CAYKVB000000000	SAMEA117401528	Enterococcus cecorum
GCA_964378805.1	CAYKPL000000000	SAMEA117401550	Enterococcus durans
GCA_964379205.1	CAYKQJ000000000	SAMEA117401605	Enterococcus faecalis
GCA_964379425.1	CAYKRU000000000	SAMEA117401531	Enterococcus faecium
GCA_964380295.1	CAYKVC000000000	SAMEA117401530	Enterococcus gallinarum
GCA_964378945.1	CAYKPZ000000000	SAMEA117401607	Enterococcus hirae
GCA_964378935.1	CAYKQA000000000	SAMEA117401553	Escherichia coli
GCA_964379875.1	CAYKTP000000000	SAMEA117401532	Klebsiella pneumoniae
GCA_964379475.1	CAYKSR000000000	SAMEA117401537	Lacrimispora saccharolytica
GCA_964379725.1	CAYKSD000000000	SAMEA117401660	Lactobacillus crispatus
GCA_964379975.1	CAYKTW000000000	SAMEA117401554	Lactobacillus crispatus
GCA_964379105.1	CAYKQI000000000	SAMEA117401613	Lactobacillus crispatus
GCA_964380045.1	CAYKUI000000000	SAMEA117401643	Lactobacillus gallinarum
GCA_964378785.1	CAYKPJ000000000	SAMEA117401610	Lactobacillus gallinarum
GCA_964378795.1	CAYKPI000000000	SAMEA117401608	Lactobacillus johnsonii
GCA_964379735.1	CAYKST000000000	SAMEA117401634	Lactobacillus johnsonii
GCA_964379825.1	CAYKSK000000000	SAMEA117401574	Ligilactobacillus aviarius
GCA_964380205.1	CAYKUT000000000	SAMEA117401529	Ligilactobacillus salivarius
GCA_964378835.1	CAYKPK000000000	SAMEA117401614	Ligilactobacillus salivarius
GCA_964378695.1	CAYKPD000000000	SAMEA117401617	Limosilactobacillus oris
GCA_964379555.1	CAYKRV000000000	SAMEA117401600	Limosilactobacillus reuteri
GCA_964378895.1	CAYKPY000000000	SAMEA117401544	Limosilactobacillus reuteri
GCA_964379125.1	CAYKQQ000000000	SAMEA117401598	Limosilactobacillus vaginalis
GCA_964379155.1	CAYKQK000000000	SAMEA117401611	Limosilactobacillus vaginalis
GCA_964379525.1	CAYKTD000000000	SAMEA117401591	Mediterraneibacter glycyrrhizinilyticus
GCA_964378745.1	CAYKPH000000000	SAMEA117401555	Megamonas funiformis
GCA_964379395.1	CAYKRS000000000	SAMEA117401662	Oligella ureolytica
GCA_964380305.1	CAYKVF000000000	SAMEA117401538	Parabacteroides distasonis
GCA_964380255.1	CAYKVA000000000	SAMEA117401534	Phocaeicola dorei
GCA_964378965.1	CAYKQC000000000	SAMEA117401527	Weissella confusa
GCA_964379765.1	CAYKTE000000000	SAMEA117401593	uncultured Agathobaculum sp.
GCA_964379575.1	CAYKSY000000000	SAMEA117401645	uncultured Agathobaculum sp.
GCA_964378915.1	CAYKPW000000000	SAMEA117401612	uncultured Alistipes sp.
GCA_964379385.1	CAYKRR000000000	SAMEA117401656	uncultured Alistipes sp.
GCA_964380315.1	CAYKVI000000000	SAMEA117401623	uncultured Anaeromassilibacillus sp.
GCA_964379215.1	CAYKRC000000000	SAMEA117401568	uncultured Anaeromassilibacillus sp.
GCA_964379495.1	CAYKSP000000000	SAMEA117401629	uncultured Anaerotignum sp.
GCA_964379965.1	CAYKTY000000000	SAMEA117401551	uncultured Barnesiella sp.
GCA_964378815.1	CAYKPR000000000	SAMEA117401546	uncultured Barnesiella sp.
GCA_964380175.1	CAYKUV000000000	SAMEA117401597	uncultured Butyricicoccus sp.
GCA_964378975.1	CAYKQD000000000	SAMEA117401562	uncultured Clostridia bacterium
GCA_964379615.1	CAYKSB000000000	SAMEA117401595	uncultured Clostridia bacterium
GCA_964380225.1	CAYKUU000000000	SAMEA117401647	uncultured Clostridia bacterium
GCA_964379085.1	CAYKQY000000000	SAMEA117401632	uncultured Clostridia bacterium
GCA_964379705.1	CAYKSO000000000	SAMEA117401624	uncultured Clostridia bacterium
GCA_964379715.1	CAYKTH000000000	SAMEA117401651	uncultured Clostridia bacterium
GCA_964379955.1	CAYKTZ000000000	SAMEA117401557	uncultured Clostridia bacterium
GCA_964380105.1	CAYKUO000000000	SAMEA117401631	uncultured Clostridia bacterium
GCA_964380325.1	CAYKVE000000000	SAMEA117401543	uncultured Clostridia bacterium
GCA_964379755.1	CAYKSN000000000	SAMEA117401572	uncultured Clostridia bacterium
GCA_964379995.1	CAYKUA000000000	SAMEA117401566	uncultured Clostridia bacterium
GCA_964380095.1	CAYKUJ000000000	SAMEA117401587	uncultured Clostridia bacterium
GCA_964380165.1	CAYKUS000000000	SAMEA117401621	uncultured Clostridia bacterium
GCA_964379645.1	CAYKTM000000000	SAMEA117401661	uncultured Corynebacterium sp.
GCA_964379805.1	CAYKTG000000000	SAMEA117401570	uncultured Eisenbergiella sp.
GCA_964379415.1	CAYKRQ000000000	SAMEA117401602	uncultured Eisenbergiella sp.
GCA_964379135.1	CAYKQH000000000	SAMEA117401601	uncultured Enterococcus sp.
GCA_964380135.1	CAYKUP000000000	SAMEA117401650	uncultured Erysipelotrichaceae bacterium
GCA_964379465.1	CAYKRX000000000	SAMEA117401589	uncultured Eubacteriales bacterium
GCA_964379885.1	CAYKTR000000000	SAMEA117401659	uncultured Eubacteriales bacterium
GCA_964378995.1	CAYKQF000000000	SAMEA117401584	uncultured Eubacteriales bacterium
GCA_964379655.1	CAYKSC000000000	SAMEA117401599	uncultured Faecalibacterium sp.
GCA_964379945.1	CAYKTX000000000	SAMEA117401558	uncultured Gemmiger sp.
GCA_964380075.1	CAYKUN000000000	SAMEA117401577	uncultured Intestinimonas sp.
GCA_964379455.1	CAYKSA000000000	SAMEA117401539	uncultured Lachnoclostridium sp.
GCA_964379585.1	CAYKRW000000000	SAMEA117401564	uncultured Lachnoclostridium sp.
GCA_964379935.1	CAYKTV000000000	SAMEA117401565	uncultured Lachnoclostridium sp.
GCA_964380275.1	CAYKVG000000000	SAMEA117401535	uncultured Lachnospiraceae bacterium
GCA_964380235.1	CAYKVD000000000	SAMEA117401596	uncultured Lachnospiraceae bacterium
GCA_964380085.1	CAYKUM000000000	SAMEA117401635	uncultured Lachnospiraceae bacterium
GCA_964378775.1	CAYKPT000000000	SAMEA117401616	uncultured Lactobacillaceae bacterium
GCA_964380025.1	CAYKUC000000000	SAMEA117401626	uncultured Lactobacillus sp.
GCA_964380015.1	CAYKUG000000000	SAMEA117401581	uncultured Lactobacillus sp.
GCA_964379665.1	CAYKSE000000000	SAMEA117401653	uncultured Lactobacillus sp.
GCA_964378985.1	CAYKQE000000000	SAMEA117401609	uncultured Lactobacillus sp.
GCA_964379915.1	CAYKTS000000000	SAMEA117401552	uncultured Limosilactobacillus sp.
GCA_964380065.1	CAYKUE000000000	SAMEA117401573	uncultured Merdibacter sp.
GCA_964380145.1	CAYKUQ000000000	SAMEA117401648	uncultured Oscillospiraceae bacterium
GCA_964379535.1	CAYKSH000000000	SAMEA117401625	uncultured Oscillospiraceae bacterium
GCA_964379065.1	CAYKQX000000000	SAMEA117401576	uncultured Oscillospiraceae bacterium
GCA_964380035.1	CAYKUD000000000	SAMEA117401630	uncultured Oscillospiraceae bacterium
GCA_964379545.1	CAYKSV000000000	SAMEA117401567	uncultured Oscillospiraceae bacterium
GCA_964379145.1	CAYKRA000000000	SAMEA117401569	uncultured Oscillospiraceae bacterium
GCA_964379175.1	CAYKQN000000000	SAMEA117401583	uncultured Oscillospiraceae bacterium
GCA_964379835.1	CAYKTI000000000	SAMEA117401637	uncultured Oscillospiraceae bacterium
GCA_964379375.1	CAYKRT000000000	SAMEA117401575	uncultured Oscillospiraceae bacterium
GCA_964379905.1	CAYKTU000000000	SAMEA117401540	uncultured Oscillospiraceae bacterium
GCA_964379435.1	CAYKSG000000000	SAMEA117401579	uncultured Oscillospiraceae bacterium
GCA_964379685.1	CAYKSX000000000	SAMEA117401627	uncultured Oscillospiraceae bacterium
GCA_964379895.1	CAYKTQ000000000	SAMEA117401547	uncultured Oscillospiraceae bacterium
GCA_964379035.1	CAYKRB000000000	SAMEA117401639	uncultured Oscillospiraceae bacterium
GCA_964379365.1	CAYKRY000000000	SAMEA117401641	uncultured Phascolarctobacterium sp.
GCA_964379095.1	CAYKQU000000000	SAMEA117401582	uncultured Pseudoflavonifractor sp.
GCA_964379195.1	CAYKQZ000000000	SAMEA117401541	uncultured Rhodospirillales bacterium
GCA_964379815.1	CAYKTO000000000	SAMEA117401560	uncultured Ruminococcus sp.
GCA_964379235.1	CAYKRD000000000	SAMEA117401585	uncultured Ruthenibacterium sp.
GCA_964380245.1	CAYKUZ000000000	SAMEA117401545	uncultured Streptococcus sp.
GCA_964380335.1	CAYKVH000000000	SAMEA117401536	uncultured Sutterellaceae bacterium

BioProject

Result Filters

Display Settings:

Send to:

Links from Nucleotide

Metagenome assembly of PRJEB63360 data set (The workers’ microbiomes are the main route of dispersion of antimicrobial resistance from the food system to the human local population.)

Supplemental Content

Related information

Recent activity