hypersaline lake metagenome (ID 53357) - BioProject

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Accession: PRJNA53357 ID: 53357

hypersaline lake metagenome

Hypersaline water microbial communities from Lake Tyrrell, Victoria, Australia

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This project is a component of the Hypersaline water microbial communities from Lake Tyrrell, Victoria, Australia

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21 additional projects are components of the Hypersaline water microbial communities from Lake Tyrrell, Victoria, Australia.

Filtered water samples from Lake Tyrrell, Victoria, Australia.

Accession	PRJNA53357
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	hypersaline lake metagenome[Taxonomy ID: 904678] unclassified sequences; metagenomes; ecological metagenomes; hypersaline lake metagenome
Publications	Podell S et al., "Assembly-driven community genomics of a hypersaline microbial ecosystem.", PLoS One, 2013;8(4):e61692 Narasingarao P et al., "De novo metagenomic assembly reveals abundant novel major lineage of Archaea in hypersaline microbial communities.", ISME J, 2012 Jan;6(1):81-93
Submission	Registration date: 18-Mar-2013 University of California, San Diego, Scripps Institution of Oceanography

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	15480
WGS master	3
Publications
PubMed	2
PMC	2
Other datasets
BioSample	1
Assembly	3

Assembly details:

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Assembly level

Number of Assemblies

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3
3

Assembly	WGS	BioSample	Taxonomy
GCA_000220375.1	AEIY00000000	SAMN01940911	Candidatus Nanosalina sp. J07AB43
GCA_000220355.1	AEIX00000000	SAMN01940911	Candidatus Nanosalinarum sp. J07AB56
GCA_000347535.1	APHM00000000	SAMN01940911	hypersaline lake metagenome

Related Project Category: Same Sample

PRJNA176224 : Haloquadratum walsbyi J07HQW1 Metagenomic Assembly
PRJNA176225 : Haloquadratum walsbyi J07HQW2 Metagenomic Assembly
PRJNA176227 : Haloquadratum sp. J07HQX50 Metagenomic Assembly
PRJNA176228 : Halonotius sp. J07HN6 Metagenomic Assembly
PRJNA176230 : Halorubrum sp. J07HR59 Metagenomic Assembly
PRJNA176231 : halophilic archaeon J07HX5 Genome sequencing and assembly
PRJNA176232 : Salinibacter sp. J07SB67 Metagenomic Assembly
PRJNA52645 : Candidatus Nanosalinarum sp. J07AB56 Metagenomic Assembly
PRJNA52647 : Candidatus Nanosalina sp. J07AB43 Metagenomic Assembly
PRJNA68587 : Uncultured archaeon 16S rRNA Targeted Locus
PRJNA70847 : Halonotius sp. J07HN4 Genome sequencing and assembly
PRJNA70851 : halophilic archaeon J07HX64 strain:J07AX64 Genome sequencing and assembly
PRJNA70861 : halophilic archaeon J07HB67 strain:J07HX67 Genome sequencing and assembly

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hypersaline lake metagenome

Hypersaline water microbial communities from Lake Tyrrell, Victoria, Australia

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