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Accession: PRJNA64815 ID: 64815

Bacteroides fragilis CL05T00C42

Reference genome for the Human Microbiome Project

See Genome Information for Bacteroides fragilis
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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)
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180 additional projects are related by organism.
2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).
Reference genome for the Human Microbiome Project.

Another assembly of this organism was generated independently from the HMP reference genome, using PacBio and Illumina sequence reads.

AccessionPRJNA64815
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismBacteroides fragilis CL05T00C42[Taxonomy ID: 997880]
Bacteria; Pseudomonadati; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides fragilis; Bacteroides fragilis CL05T00C42
PublicationsRibeiro FJ et al., "Finished bacterial genomes from shotgun sequence data.", Genome Res, 2012 Nov;22(11):2270-7
SubmissionRegistration date: 15-Jun-2012
Broad Institute
Locus Tag PrefixHMPREF1079
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)44
WGS master2
SRA Experiments5
Protein Sequences4429
Publications
PubMed1
PMC1
Other datasets
BioSample2
Assembly2
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases4
Data volume, Mbytes8551

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