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Items: 15

1.

Lactobacillus

The Lactobacillus genus, a use case for Bactopia.

Umbrella project
Emory University
Accession:
PRJNA608517
ID:
608517
2.

RefSeq Targeted Loci Project

Umbrella project
NCBI
Accession:
PRJNA224725
ID:
224725
3.

Bacteria

Bacterial 23S Ribosomal RNA RefSeq Targeted Loci Project

Taxonomy:
Bacteria (eubacteria)
Project data type: RefSeq Targeted Locus (Loci)
Scope:
Multiisolate
NCBI
Accession:
PRJNA188943
ID:
188943
4.

Bacteria

Bacterial 5S Ribosomal RNA RefSeq Targeted Loci Project

Taxonomy:
Bacteria (eubacteria)
Project data type: RefSeq Targeted Locus (Loci)
Scope:
Multiisolate
NCBI
Accession:
PRJNA188106
ID:
188106
5.

Lacticaseibacillus paracasei ATCC 334

Lacticaseibacillus paracasei ATCC 334 RefSeq Genome

Taxonomy:
Lacticaseibacillus paracasei ATCC 334
Project data type: RefSeq Genome
Scope:
Monoisolate
NCBI
Accession:
PRJNA57985
ID:
57985
6.

Bacteria

Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project

Taxonomy:
Bacteria (eubacteria)
Project data type: RefSeq Targeted Locus (Loci)
Scope:
Multiisolate
NCBI
Accession:
PRJNA33175
ID:
33175
7.

Streptococcus thermophilus LMD-9

Used in the manufacture of fermented dairy foods, such as yogurt and mozzarella cheese.

Taxonomy:
Streptococcus thermophilus LMD-9
Project data type: Genome sequencing
Scope:
Monoisolate
US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Accession:
PRJNA13773
ID:
13773
8.

Levilactobacillus brevis ATCC 367

Starter culture for beer, soudough, and silage

Taxonomy:
Levilactobacillus brevis ATCC 367
Project data type: Genome sequencing
Scope:
Monoisolate
US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Accession:
PRJNA404
ID:
404
9.

Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365

Thermophilic starter culture for yogurt and Swiss and Italian-type cheeses

Taxonomy:
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Project data type: Genome sequencing
Scope:
Monoisolate
US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Accession:
PRJNA403
ID:
403
10.

Lacticaseibacillus paracasei ATCC 334

Starter culture for milk fermentation and flavor development of cheese

Taxonomy:
Lacticaseibacillus paracasei ATCC 334
Project data type: Genome sequencing
Scope:
Multiisolate
US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Accession:
PRJNA402
ID:
402
11.

Lactococcus cremoris subsp. cremoris SK11

Used extensively in hard cheese production

Taxonomy:
Lactococcus cremoris subsp. cremoris SK11
Project data type: Genome sequencing
Scope:
Monoisolate
US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Accession:
PRJNA401
ID:
401
12.

Pediococcus pentosaceus ATCC 25745

An industrially important lactic acid bacteria.

Taxonomy:
Pediococcus pentosaceus ATCC 25745
Project data type: Genome sequencing
Scope:
Monoisolate
US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Accession:
PRJNA398
ID:
398
13.

Oenococcus oeni PSU-1

Used for secondary fermentation in wine production

Taxonomy:
Oenococcus oeni PSU-1
Project data type: Genome sequencing
Scope:
Monoisolate
US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Accession:
PRJNA317
ID:
317
14.

Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Used in industrial food fermentations

Taxonomy:
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Project data type: Genome sequencing
Scope:
Monoisolate
US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Accession:
PRJNA315
ID:
315
15.

Lactobacillus gasseri ATCC 33323 = JCM 1131

Major homofermentative Lactobacillus in human intestinal tract

Taxonomy:
Lactobacillus gasseri ATCC 33323 = JCM 1131
Project data type: Genome sequencing
Scope:
Monoisolate
US DOE Joint Genome Institute (JGI), The Lactic Acid Bacteria Genome Consortium and Fidelity Systems Inc.
Accession:
PRJNA84
ID:
84

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