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Accession: PRJNA144927 ID: 144927

Escherichia coli

E.coli response to Antimicrobial Arylamides

See Genome Information for Escherichia coli
We treated logarithmically growing cultures of E.coli with a sub-lethal dose of an antimicrobial arylamide compound (PMX 10070) and Polymyxin B sulfate to measure transcriptional responses in an effort to understand mechanism of action Treated samples were assayed at time = 20min and time = 60min after arylamide and polymyxin B exposure Overall design: E. More...
AccessionPRJNA144927; GEO: GSE31140
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
PublicationsMensa B et al., "Antibacterial mechanism of action of arylamide foldamers.", Antimicrob Agents Chemother, 2011 Nov;55(11):5043-53
SubmissionRegistration date: 3-Aug-2011
DeGrado Lab, Biochemistry and Biophysics, University of Pennsylvania, School of Medicine
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Publications
PubMed1
PMC1
Other datasets
GEO DataSets2
GEO Data Details
ParameterValue
Data volume, Spots183744
Data volume, Processed Mbytes4
Data volume, Supplementary Mbytes18

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