Bacteria (ID 327110) - BioProject

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Accession: PRJNA327110 ID: 327110

Bacteria

Single Nucleotide Polymorphism (SNP) Variation in Foodborne Isolates After 100 Subcultures

Single Nucleotide Polymorphism (SNP) Variation in Foodborne Isolates After 100 Subcultures. More...

Accession	PRJNA327110
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 28-Jun-2016 Health Canada
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5716
WGS master	31
SRA Experiments	16
Protein Sequences	135059
Other datasets
BioSample	34
Assembly	31

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

18
13
31

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_002144185.1	MBOE00000000	SAMN05301359	02-6737_100	Escherichia coli
GCA_002144165.1	MBOD00000000	SAMN05301357	02-6737_1	Escherichia coli
GCA_002144145.1	MBOC00000000	SAMN05301328	11-3088_100	Escherichia coli
GCA_002144135.1	MBOB00000000	SAMN05301327	11-3088_1	Escherichia coli
GCA_002144105.1	MBNZ00000000	SAMN05301325	10-2735_1	Escherichia coli
GCA_002144095.1	MBOA00000000	SAMN05301326	10-2735_100	Escherichia coli
GCA_002144065.1	MBOJ00000000	SAMN05301324	ATCC 35150_100	Escherichia coli
GCA_002144055.1	MBOI00000000	SAMN05301323	ATCC 35150_1	Escherichia coli
GCA_002144335.1	MBON00000000	SAMN05301561	HPB1044_100	Listeria monocytogenes
GCA_002144315.1	MBOM00000000	SAMN05301559	HPB1044_1	Listeria monocytogenes
GCA_002144295.1	MBOK00000000	SAMN05301555	HPB5415_1	Listeria monocytogenes
GCA_002144265.1	MBOL00000000	SAMN05301557	HPB5415_100	Listeria monocytogenes
GCA_002144255.1	MBOH00000000	SAMN05301543	HPB1631_100	Listeria monocytogenes
GCA_002144235.1	MBOG00000000	SAMN05301541	HPB1631_1	Listeria monocytogenes
GCA_002144215.1	MBOF00000000	SAMN05301536	HPB2863_1	Listeria monocytogenes
GCA_002144485.1	MBOV00000000	SAMN05301534	SN0033_100	Salmonella enterica subsp. enterica serovar Newport
GCA_002144475.1	MBOU00000000	SAMN05301533	SN0033_1	Salmonella enterica subsp. enterica serovar Newport
GCA_002144455.1	MBOS00000000	SAMN05301515	SN2667_1	Salmonella enterica subsp. enterica serovar Newport
GCA_002144435.1	MBOT00000000	SAMN05301532	SN2667_100	Salmonella enterica subsp. enterica serovar Newport
GCA_002144415.1	MBOR00000000	SAMN05301514	STy2299_100	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002144395.1	MBOQ00000000	SAMN05301513	STy2299_1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002144365.1	MBOP00000000	SAMN05301512	STy1039_100	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002144355.1	MBOO00000000	SAMN05301511	STy1039_1	Salmonella enterica subsp. enterica serovar Typhimurium
GCA_002144655.1	MBPD00000000	SAMN05301510	HS-06-05_100	Vibrio parahaemolyticus
GCA_002144615.1	MBPB00000000	SAMN05301463	HS-13-1_100	Vibrio parahaemolyticus
GCA_002144625.1	MBPC00000000	SAMN05301509	HS-06-05_1	Vibrio parahaemolyticus
GCA_002144585.1	MBPA00000000	SAMN05301462	HS-13-1_1	Vibrio parahaemolyticus
GCA_002144575.1	MBOY00000000	SAMN05301460	09-3216_1	Vibrio parahaemolyticus
GCA_002144555.1	MBOZ00000000	SAMN05301461	09-3216_100	Vibrio parahaemolyticus
GCA_002144535.1	MBOX00000000	SAMN05301458	04-2548_100	Vibrio parahaemolyticus
GCA_002144515.1	MBOW00000000	SAMN05301360	04-2548_1	Vibrio parahaemolyticus

SRA Data Details

Parameter	Value
Data volume, Gbases	16
Data volume, Mbytes	8305

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Single Nucleotide Polymorphism (SNP) Variation in Foodborne Isolates After 100 Subcultures

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