Clostridioides difficile (ID 340238) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from Protein

Accession: PRJNA340238 ID: 340238

Clostridioides difficile

Genome sequencing and assembly of clinical Clostridium difficile isolates from children

See Genome Information for Clostridioides difficile

Navigate Across

745 additional projects are related by organism.

Clinical C. difficile isolates previously collected from children with C. difficile infection at a single center and previously characterized by restriction endonuclease analysis underwent whole genome sequencing. More...

Accession	PRJNA340238
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Clostridioides difficile[Taxonomy ID: 1496] Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile
Grants	"Molecular epidemiologic survey and risk factor assessment of Clostridium difficile infections in children" (Grant ID 11854, Thrasher Research Fund)
Submission	Registration date: 14-Sep-2017 Ann & Robert H. Lurie Children's Hospital of Chicago
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	35416
WGS master	134
Protein Sequences	495271
Other datasets
BioSample	134
Assembly	134

Genome assemblies, organelles and plasmids:

Assembly GCA_002300835.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MNBA00000000

Assembly GCA_002300845.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MNBB00000000

Assembly GCA_002300855.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MNBQ00000000

Assembly GCA_002300865.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MNBR00000000

Assembly GCA_002300915.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MNBT00000000

Assembly GCA_002300925.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MNBS00000000

Assembly GCA_002300935.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MNBP00000000

Assembly GCA_002300955.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MNBU00000000

Assembly GCA_002300995.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MNBV00000000

Assembly GCA_002301015.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPC00000000

Assembly GCA_002301025.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPE00000000

Assembly GCA_002301035.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPD00000000

Assembly GCA_002301075.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPF00000000

Assembly GCA_002301085.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPG00000000

Assembly GCA_002301095.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPH00000000

Assembly GCA_002301105.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPI00000000

Assembly GCA_002301125.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPJ00000000

Assembly GCA_002301145.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPK00000000

Assembly GCA_002301165.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPL00000000

Assembly GCA_002301185.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPM00000000

Assembly GCA_002301235.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPN00000000

Assembly GCA_002301245.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPP00000000

Assembly GCA_002301255.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPO00000000

Assembly GCA_002301265.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPQ00000000

Assembly GCA_002301305.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPZ00000000

Assembly GCA_002301325.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQG00000000

Assembly GCA_002301335.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQH00000000

Assembly GCA_002301375.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQJ00000000

Assembly GCA_002301395.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPS00000000

Assembly GCA_002301405.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPT00000000

Assembly GCA_002301435.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPW00000000

Assembly GCA_002301455.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPX00000000

Assembly GCA_002301465.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPY00000000

Assembly GCA_002301495.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQA00000000

Assembly GCA_002301505.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQB00000000

Assembly GCA_002301525.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQC00000000

Assembly GCA_002301555.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQD00000000

Assembly GCA_002301575.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQE00000000

Assembly GCA_002301595.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQF00000000

Assembly GCA_002301615.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQI00000000

Assembly GCA_002301635.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQK00000000

Assembly GCA_002301655.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQL00000000

Assembly GCA_002301675.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQM00000000

Assembly GCA_002301695.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPU00000000

Assembly GCA_002301705.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPV00000000

Assembly GCA_002301715.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQN00000000

Assembly GCA_002301735.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQO00000000

Assembly GCA_002301765.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQP00000000

Assembly GCA_002301785.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQQ00000000

Assembly GCA_002301805.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQR00000000

Assembly GCA_002301835.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQW00000000

Assembly GCA_002301845.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQX00000000

Assembly GCA_002301855.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQV00000000

Assembly GCA_002301895.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQU00000000

Assembly GCA_002301905.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQT00000000

Assembly GCA_002301925.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQS00000000

Assembly GCA_002301945.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEP00000000

Assembly GCA_002301955.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEQ00000000

Assembly GCA_002301975.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPER00000000

Assembly GCA_002301985.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQY00000000

Assembly GCA_002302005.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPES00000000

Assembly GCA_002302055.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPET00000000

Assembly GCA_002302065.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEU00000000

Assembly GCA_002302075.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEV00000000

Assembly GCA_002302085.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPGE00000000

Assembly GCA_002302115.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPGA00000000

Assembly GCA_002302125.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEW00000000

Assembly GCA_002302145.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEX00000000

Assembly GCA_002302165.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEY00000000

Assembly GCA_002302185.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFA00000000

Assembly GCA_002302205.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFB00000000

Assembly GCA_002302225.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFC00000000

Assembly GCA_002302245.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEK00000000

Assembly GCA_002302265.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFZ00000000

Assembly GCA_002302285.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEM00000000

Assembly GCA_002302305.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEN00000000

Assembly GCA_002302465.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEO00000000

Assembly GCA_002302585.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPGB00000000

Assembly GCA_002302685.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEZ00000000

Assembly GCA_002302725.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFF00000000

Assembly GCA_002302745.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFG00000000

Assembly GCA_002302755.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPEL00000000

Assembly GCA_002302765.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFE00000000

Assembly GCA_002302795.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFH00000000

Assembly GCA_002302805.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFI00000000

Assembly GCA_002302835.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFJ00000000

Assembly GCA_002302845.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPGC00000000

Assembly GCA_002302865.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFK00000000

Assembly GCA_002302885.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFL00000000

Assembly GCA_002302905.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFM00000000

Assembly GCA_002302925.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFN00000000

Assembly GCA_002302945.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFO00000000

Assembly GCA_002302975.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPGN00000000

Assembly GCA_002302985.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPGG00000000

Assembly GCA_002303005.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPGO00000000

Assembly GCA_002303025.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFP00000000

Assembly GCA_002303045.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFQ00000000

Assembly GCA_002303075.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFS00000000

Assembly GCA_002303085.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFR00000000

Assembly GCA_002303105.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFT00000000

Assembly GCA_002303125.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFU00000000

Assembly GCA_002303155.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFV00000000

Assembly GCA_002303165.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFW00000000

Assembly GCA_002303185.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFX00000000

Assembly GCA_002303215.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFY00000000

Assembly GCA_002303225.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPJN00000000

Assembly GCA_002303245.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTA00000000

Assembly GCA_002303265.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPJP00000000

Assembly GCA_002303305.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPJO00000000

Assembly GCA_002303325.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOSX00000000

Assembly GCA_002303345.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOSY00000000

Assembly GCA_002303365.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOSZ00000000

Assembly GCA_002303385.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTB00000000

Assembly GCA_002303415.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTD00000000

Assembly GCA_002303425.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTC00000000

Assembly GCA_002303445.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPJQ00000000

Assembly GCA_002303465.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTE00000000

Assembly GCA_002303485.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTF00000000

Assembly GCA_002303505.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTG00000000

Assembly GCA_002303525.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTH00000000

Assembly GCA_002303545.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTI00000000

Assembly GCA_002303575.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTJ00000000

Assembly GCA_002303585.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTK00000000

Assembly GCA_002303605.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPJR00000000

Assembly GCA_002303635.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPJS00000000

Assembly GCA_002303655.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTL00000000

Assembly GCA_002303675.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTM00000000

Assembly GCA_002303695.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTN00000000

Assembly GCA_002303715.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOTO00000000

Assembly GCA_002304245.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPFD00000000

Assembly GCA_002304255.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPGF00000000

Assembly GCA_002304265.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MPGD00000000

Assembly GCA_002304575.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOPR00000000

Assembly GCA_002304585.1 :

Name	GenBank
Whole Genome Shotgun Assembly	MOQZ00000000

BioProject

Result Filters

Display Settings:

Send to:

Links from Protein

Clostridioides difficile

Genome sequencing and assembly of clinical Clostridium difficile isolates from children

Supplemental Content

Related information

LinkOut to external resources

Recent activity