Clostridium perfringens (ID 422745) - BioProject

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Accession: PRJNA422745 ID: 422745

Clostridium perfringens

Whole genome analysis reveals the diversity and evolutionary relationships between necrotic enteritis-causing strains of Clostridium perfringens

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This study used whole genome analysis to examine the diversity and evolutionary relationships between necrotic enteritis-causing strains and non-pathogenic strains of Clostridium perfringens

Accession	PRJNA422745
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Clostridium perfringens[Taxonomy ID: 1502] Bacteria; Bacillati; Bacillota; Clostridia; Eubacteriales; Clostridiaceae; Clostridium; Clostridium perfringens
Publications	Lacey JA et al., "Whole genome analysis reveals the diversity and evolutionary relationships between necrotic enteritis-causing strains of Clostridium perfringens.", BMC Genomics, 2018 May 22;19(1):379
Submission	Registration date: 31-May-2018 RMIT
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2923
WGS master	34
Genomic DNA	4
Protein Sequences	98689
Publications
PubMed	1
PMC	1
Other datasets
BioSample	36
Assembly	35

Assembly details:

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Assembly level

Number of Assemblies

1
15
19
35

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_003181995.1	PJTC00000000		SAMN07326146	EHE-NE7	Clostridium perfringens
GCA_003181955.1	PJSU00000000		SAMN07326155	NobL1	Clostridium perfringens
GCA_003181965.1	PJSX00000000		SAMN07326151	K473	Clostridium perfringens
GCA_003181925.1	PJSS00000000		SAMN07326157	PBS5	Clostridium perfringens
GCA_003181915.1	PJSR00000000		SAMN07326158	PC5	Clostridium perfringens
GCA_003181895.1	PJSO00000000		SAMN07326161	11	Clostridium perfringens
GCA_003181875.1	PJSL00000000		SAMN07326165	SOM-NE34	Clostridium perfringens
GCA_003181835.1	PJTH00000000		SAMN07326176	Warren	Clostridium perfringens
GCA_003181845.1	PJSH00000000		SAMN07326175	W1319	Clostridium perfringens
GCA_003181815.1	PJTF00000000		SAMN07326143	96-7415	Clostridium perfringens
GCA_003181795.1	PJTE00000000		SAMN07326144	98.78718-2	Clostridium perfringens
GCA_003181775.1	PJTD00000000		SAMN07326145	BER-NE33	Clostridium perfringens
GCA_003181735.1	PJTA00000000		SAMN07326148	FC2	Clostridium perfringens
GCA_003181745.1	PJTB00000000		SAMN07326147	EUR-NE15	Clostridium perfringens
GCA_003181695.1	PJSY00000000		SAMN07326150	ITX1105-12MP	Clostridium perfringens
GCA_003181705.1	PJSZ00000000		SAMN07326149	GNP-1	Clostridium perfringens
GCA_003181675.1	PJSW00000000		SAMN07326152	NAG-NE1	Clostridium perfringens
GCA_003181655.1	PJSV00000000		SAMN07326154	NAG-NE31	Clostridium perfringens
GCA_003181615.1	PJSQ00000000		SAMN07326159	Pennington	Clostridium perfringens
GCA_003181625.1	PJST00000000		SAMN07326156	PBD1	Clostridium perfringens
GCA_003181595.1	PJSP00000000		SAMN07326160	SAF-1	Clostridium perfringens
GCA_003181575.1	PJSN00000000		SAMN07326162	37	Clostridium perfringens
GCA_003181555.1	PJTN00000000		SAMN07326163	48	Clostridium perfringens
GCA_003181535.1	PJSM00000000		SAMN07326164	67	Clostridium perfringens
GCA_003181505.1	PJTL00000000		SAMN07326167	TAM-NE38	Clostridium perfringens
GCA_003181495.1	PJTM00000000		SAMN07326166	SOM-NE35	Clostridium perfringens
GCA_003181475.1	PJSK00000000		SAMN07326168	TAM-NE40	Clostridium perfringens
GCA_003181455.1	PJTK00000000		SAMN07326171	TAM-NE43	Clostridium perfringens
GCA_003181415.1	PJSJ00000000		SAMN07326170	TAM-NE42	Clostridium perfringens
GCA_003181405.1	PJSI00000000		SAMN07326172	TAM-NE46	Clostridium perfringens
GCA_003181395.1	PJTG00000000		SAMN07326177	WER-NE36	Clostridium perfringens
GCA_003181365.1	PJTJ00000000		SAMN07326173	T3381	Clostridium perfringens
GCA_003181355.1	PJTI00000000		SAMN07326174	UDE 95-1372	Clostridium perfringens
GCA_003245405.1	PJUV00000000		SAMN07326169	SYD-NE41	Clostridium perfringens
GCA_003203455.1		4	SAMN08195748	EHE-NE18	Clostridium perfringens

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Clostridium perfringens

Whole genome analysis reveals the diversity and evolutionary relationships between necrotic enteritis-causing strains of Clostridium perfringens

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