Bordetella (ID 287884) - BioProject

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Accession: PRJNA287884 ID: 287884

Bordetella

Whole genome sequencing of various Bordetella species

This project is an effort by the Pertussis and Diphtheria Laboratory at the Centers for Disease Control and Prevention to characterize genomes of Bordetella species other than B. More...

Accession	PRJNA287884
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications (total 3) Less...	Weigand MR et al., "Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens.", mSystems, 2019 Nov 19;4(6) More... Weigand MR et al., "Conserved Patterns of Symmetric Inversion in the Genome Evolution of Bordetella Respiratory Pathogens.", mSystems, 2019 Nov 19;4(6) Weigand MR et al., "Complete Genome Sequences of Four Different Bordetella sp. Isolates Causing Human Respiratory Infections.", Genome Announc, 2016 Oct 6;4(5) Weigand MR et al., "Complete Genome Sequences of Two Bordetella hinzii Strains Isolated from Humans.", Genome Announc, 2015 Aug 27;3(4) Less...
Submission	Registration date: 24-Jun-2015 Centers for Disease Control and Prevention
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	177
SRA Experiments	238
Protein Sequences	674021
Publications
PubMed	3
PMC	3
Other datasets
BioSample	223
Assembly	177

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

177
177

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_012974645.1	1	SAMN06350665	Ba002	Bordetella avium
GCA_012974625.1	1	SAMN06350666	14-4061	Bordetella avium
GCA_012974605.1	1	SAMN06350667	SV1	Bordetella avium
GCA_040746095.1	1	SAMN42393021	4094	Bordetella avium
GCA_004009755.1	1	SAMN08200078	JBBA	Bordetella avium
GCA_004009615.1	1	SAMN08200077	Owl19	Bordetella avium
GCA_001704355.1	1	SAMN05333722	I328	Bordetella bronchiseptica
GCA_002859225.1	1	SAMN06124593	A310	Bordetella bronchiseptica
GCA_003184485.1	1	SAMN06756668	D973	Bordetella bronchiseptica
GCA_003184465.1	1	SAMN06756669	F709	Bordetella bronchiseptica
GCA_003186205.1	1	SAMN06688239	E001	Bordetella bronchiseptica
GCA_003186185.1	1	SAMN06688240	E010	Bordetella bronchiseptica
GCA_003186685.1	1	SAMN06688238	D755	Bordetella bronchiseptica
GCA_003186595.1	1	SAMN06688244	I943	Bordetella bronchiseptica
GCA_004008095.1	1	SAMN08016808	I124	Bordetella bronchiseptica
GCA_004006935.1	1	SAMN07774521	D987	Bordetella bronchiseptica
GCA_004006815.1	1	SAMN07774519	A345	Bordetella bronchiseptica
GCA_004006735.1	1	SAMN07774520	D448	Bordetella bronchiseptica
GCA_004634565.1	1	SAMN06350660	E016	Bordetella bronchiseptica
GCA_001078295.1	1	SAMN03790814	H568	Bordetella hinzii
GCA_001078275.1	1	SAMN03790813	F582	Bordetella hinzii
GCA_006770425.1	1	SAMN07137596	243-2	Bordetella hinzii
GCA_006770405.1	1	SAMN07137598	TR-1212	Bordetella hinzii
GCA_006770385.1	1	SAMN07137597	14-3425	Bordetella hinzii
GCA_006770365.1	1	SAMN07137599	4449	Bordetella hinzii
GCA_006770345.1	1	SAMN07137595	4134	Bordetella hinzii
GCA_006770325.1	1	SAMN07137594	SV2	Bordetella hinzii
GCA_004006875.1	1	SAMN07774523	H720	Bordetella hinzii
GCA_012974205.1	1	SAMN12525443	J790	Bordetella holmesii
GCA_012974165.1	1	SAMN09288611	J862	Bordetella holmesii
GCA_009625855.1	1	SAMN12525437	J708	Bordetella holmesii
GCA_009625815.1	1	SAMN12525439	J712	Bordetella holmesii
GCA_009626475.1	1	SAMN12525399	J168	Bordetella holmesii
GCA_009626095.1	1	SAMN12525423	J312	Bordetella holmesii
GCA_009627215.1	1	SAMN12525357	H610	Bordetella holmesii
GCA_009627195.1	1	SAMN12525359	H620	Bordetella holmesii
GCA_009627175.1	1	SAMN12525358	H619	Bordetella holmesii
GCA_009627135.1	1	SAMN12525361	H629	Bordetella holmesii
GCA_009627115.1	1	SAMN12525362	H635	Bordetella holmesii
GCA_009627095.1	1	SAMN12525363	H641	Bordetella holmesii
GCA_009627155.1	1	SAMN12525360	H628	Bordetella holmesii
GCA_009627075.1	1	SAMN12525364	H713	Bordetella holmesii
GCA_009627055.1	1	SAMN12525366	H716	Bordetella holmesii
GCA_009627015.1	1	SAMN12525368	H807	Bordetella holmesii
GCA_009626995.1	1	SAMN12525369	H808	Bordetella holmesii
GCA_009627035.1	1	SAMN12525367	H719	Bordetella holmesii
GCA_009626975.1	1	SAMN12525370	H809	Bordetella holmesii
GCA_009626955.1	1	SAMN12525371	H862	Bordetella holmesii
GCA_009626935.1	1	SAMN12525372	H863	Bordetella holmesii
GCA_009626915.1	1	SAMN12525373	H869	Bordetella holmesii
GCA_009626895.1	1	SAMN12525374	I100	Bordetella holmesii
GCA_009626815.1	1	SAMN12525378	I265	Bordetella holmesii
GCA_009626575.1	1	SAMN12525393	J102	Bordetella holmesii
GCA_009627275.1	1	SAMN12525354	H572	Bordetella holmesii
GCA_009627355.1	1	SAMN12525349	H401	Bordetella holmesii
GCA_009627295.1	1	SAMN12525352	H557	Bordetella holmesii
GCA_009627415.1	1	SAMN12525346	H385	Bordetella holmesii
GCA_009627395.1	1	SAMN12525347	H387	Bordetella holmesii
GCA_009627375.1	1	SAMN12525348	H400	Bordetella holmesii
GCA_009627575.1	1	SAMN12525339	H250	Bordetella holmesii
GCA_009627535.1	1	SAMN12525341	H318	Bordetella holmesii
GCA_009627515.1	1	SAMN12525342	H319	Bordetella holmesii
GCA_009627475.1	1	SAMN12525343	H336	Bordetella holmesii
GCA_009627455.1	1	SAMN12525344	H359	Bordetella holmesii
GCA_009627435.1	1	SAMN12525345	H370	Bordetella holmesii
GCA_009627935.1	1	SAMN12525319	F061	Bordetella holmesii
GCA_009627915.1	1	SAMN12525320	F586	Bordetella holmesii
GCA_009627895.1	1	SAMN12525322	F588	Bordetella holmesii
GCA_009627875.1	1	SAMN12525323	F589	Bordetella holmesii
GCA_009627855.1	1	SAMN12525324	F590	Bordetella holmesii
GCA_009627835.1	1	SAMN12525325	F592	Bordetella holmesii
GCA_009627815.1	1	SAMN12525326	F593	Bordetella holmesii
GCA_009627795.1	1	SAMN12525327	F594	Bordetella holmesii
GCA_009627775.1	1	SAMN12525328	F595	Bordetella holmesii
GCA_009627655.1	1	SAMN12525335	H108	Bordetella holmesii
GCA_009627615.1	1	SAMN12525337	H248	Bordetella holmesii
GCA_009627595.1	1	SAMN12525338	H249	Bordetella holmesii
GCA_009627975.1	1	SAMN12525317	D130	Bordetella holmesii
GCA_009627955.1	1	SAMN12525318	F029	Bordetella holmesii
GCA_004634545.1	1	SAMN06350662	F274	Bordetella holmesii
GCA_003186245.1	1	SAMN06688236	C690	Bordetella holmesii
GCA_003184445.1	1	SAMN06688242	F028	Bordetella holmesii
GCA_002859945.1	1	SAMN06124599	F626	Bordetella holmesii
GCA_002860025.1	1	SAMN06124601	H785	Bordetella holmesii
GCA_002860005.1	1	SAMN06124600	H656	Bordetella holmesii
GCA_002859985.1	1	SAMN06124595	F615	Bordetella holmesii
GCA_002859905.1	1	SAMN06124597	F617	Bordetella holmesii
GCA_002859885.1	1	SAMN06124598	F621	Bordetella holmesii
GCA_002859865.1	1	SAMN06124596	F616	Bordetella holmesii
GCA_002859845.1	1	SAMN06124594	F613	Bordetella holmesii
GCA_001704215.1	1	SAMN05333720	H903	Bordetella holmesii
GCA_016804285.1	1	SAMN12525353	H558	Bordetella holmesii
GCA_009627695.1	1	SAMN12525333	H104	Bordetella parapertussis
GCA_009627635.1	1	SAMN12525336	H242	Bordetella parapertussis
GCA_009627755.1	1	SAMN12525329	H100	Bordetella parapertussis
GCA_009627735.1	1	SAMN12525330	H101	Bordetella parapertussis
GCA_009627715.1	1	SAMN12525331	H102	Bordetella parapertussis
GCA_009627675.1	1	SAMN12525334	H105	Bordetella parapertussis
GCA_009627555.1	1	SAMN12525340	H314	Bordetella parapertussis
GCA_009627335.1	1	SAMN12525350	H554	Bordetella parapertussis
GCA_009627315.1	1	SAMN12525351	H555	Bordetella parapertussis
GCA_009627255.1	1	SAMN12525355	H580	Bordetella parapertussis
GCA_009626595.1	1	SAMN12525392	J069	Bordetella parapertussis
GCA_009626635.1	1	SAMN12525389	I768	Bordetella parapertussis
GCA_009626615.1	1	SAMN12525391	I962	Bordetella parapertussis
GCA_009626555.1	1	SAMN12525394	J116	Bordetella parapertussis
GCA_009626535.1	1	SAMN12525395	J156	Bordetella parapertussis
GCA_009626515.1	1	SAMN12525396	J158	Bordetella parapertussis
GCA_009626835.1	1	SAMN12525377	I143	Bordetella parapertussis
GCA_009626855.1	1	SAMN12525376	I139	Bordetella parapertussis
GCA_009626795.1	1	SAMN12525379	I267	Bordetella parapertussis
GCA_009626775.1	1	SAMN12525381	I288	Bordetella parapertussis
GCA_009626735.1	1	SAMN12525383	I308	Bordetella parapertussis
GCA_009626755.1	1	SAMN12525382	I301	Bordetella parapertussis
GCA_009626715.1	1	SAMN12525384	I325	Bordetella parapertussis
GCA_009626695.1	1	SAMN12525385	I326	Bordetella parapertussis
GCA_009626675.1	1	SAMN12525386	I457	Bordetella parapertussis
GCA_009626655.1	1	SAMN12525387	I458	Bordetella parapertussis
GCA_009626875.1	1	SAMN12525375	I133	Bordetella parapertussis
GCA_009627235.1	1	SAMN12525356	H581	Bordetella parapertussis
GCA_009626075.1	1	SAMN12525424	J324	Bordetella parapertussis
GCA_009626055.1	1	SAMN12525425	J326	Bordetella parapertussis
GCA_009626035.1	1	SAMN12525427	J328	Bordetella parapertussis
GCA_009626015.1	1	SAMN12525426	J327	Bordetella parapertussis
GCA_009625995.1	1	SAMN12525428	J396	Bordetella parapertussis
GCA_009625975.1	1	SAMN12525429	J456	Bordetella parapertussis
GCA_009625955.1	1	SAMN12525430	J593	Bordetella parapertussis
GCA_009625935.1	1	SAMN12525431	J599	Bordetella parapertussis
GCA_009625915.1	1	SAMN12525432	J602	Bordetella parapertussis
GCA_009625895.1	1	SAMN12525433	J611	Bordetella parapertussis
GCA_009625875.1	1	SAMN12525435	J676	Bordetella parapertussis
GCA_009626455.1	1	SAMN12525402	J217	Bordetella parapertussis
GCA_009626435.1	1	SAMN12525404	J219	Bordetella parapertussis
GCA_009626415.1	1	SAMN12525405	J220	Bordetella parapertussis
GCA_009626395.1	1	SAMN12525406	J221	Bordetella parapertussis
GCA_009626375.1	1	SAMN12525407	J278	Bordetella parapertussis
GCA_009626355.1	1	SAMN12525408	J279	Bordetella parapertussis
GCA_009626335.1	1	SAMN12525409	J280	Bordetella parapertussis
GCA_009626315.1	1	SAMN12525410	J281	Bordetella parapertussis
GCA_009626295.1	1	SAMN12525411	J282	Bordetella parapertussis
GCA_009626275.1	1	SAMN12525413	J284	Bordetella parapertussis
GCA_009626255.1	1	SAMN12525415	J287	Bordetella parapertussis
GCA_009626235.1	1	SAMN12525416	J289	Bordetella parapertussis
GCA_009626215.1	1	SAMN12525417	J290	Bordetella parapertussis
GCA_009626195.1	1	SAMN12525418	J291	Bordetella parapertussis
GCA_009626175.1	1	SAMN12525419	J292	Bordetella parapertussis
GCA_009626155.1	1	SAMN12525420	J293	Bordetella parapertussis
GCA_009626135.1	1	SAMN12525421	J297	Bordetella parapertussis
GCA_009626115.1	1	SAMN12525422	J307	Bordetella parapertussis
GCA_009625795.1	1	SAMN12525442	J786	Bordetella parapertussis
GCA_009625775.1	1	SAMN12525444	J792	Bordetella parapertussis
GCA_009625755.1	1	SAMN12525445	J835	Bordetella parapertussis
GCA_009625735.1	1	SAMN12525446	J859	Bordetella parapertussis
GCA_009625835.1	1	SAMN12525438	J711	Bordetella parapertussis
GCA_009626495.1	1	SAMN12525397	J166	Bordetella parapertussis
GCA_012974185.1	1	SAMN12525441	J778	Bordetella parapertussis
GCA_012974225.1	1	SAMN12525436	J677	Bordetella parapertussis
GCA_001704255.1	1	SAMN05333721	H904	Bordetella parapertussis
GCA_002859965.1	1	SAMN06124602	H889	Bordetella parapertussis
GCA_003186225.1	1	SAMN06688237	D577	Bordetella parapertussis
GCA_003186305.1	1	SAMN06688241	E738	Bordetella parapertussis
GCA_003186285.1	1	SAMN06688243	I440	Bordetella parapertussis
GCA_003186265.1	1	SAMN06688234	A747	Bordetella parapertussis
GCA_003186765.1	1	SAMN06688235	B337	Bordetella parapertussis
GCA_004634525.1	1	SAMN06350663	E762	Bordetella parapertussis
GCA_004634505.1	1	SAMN06350664	E843	Bordetella parapertussis
GCA_004007035.1	1	SAMN07774522	F585	Bordetella parapertussis
GCA_004008035.1	1	SAMN08016807	B271	Bordetella parapertussis
GCA_004008355.1	1	SAMN08105889	B149	Bordetella parapertussis
GCA_004008295.1	1	SAMN08016806	A005	Bordetella parapertussis
GCA_004008215.1	1	SAMN08105890	B160	Bordetella parapertussis
GCA_004008155.1	1	SAMN08105888	B144	Bordetella parapertussis
GCA_016804265.1	1	SAMN12525401	J216	Bordetella parapertussis
GCA_001704295.1	1	SAMN03940794	H567	Bordetella sp. H567
GCA_004006215.1	1	SAMN06350661	J329	Bordetella sp. J329
GCA_003991115.1	1	SAMN05333717	F581	Bordetella trematum
GCA_002860045.1	1	SAMN06124603	E202	Bordetella trematum

SRA Data Details

Parameter	Value
Data volume, Gbases	202
Data volume, Tbytes	0.15

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Bordetella

Whole genome sequencing of various Bordetella species

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