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Accession: PRJNA472146 ID: 472146

ecological metagenomes

Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea

Assembly of methane-cycling / short-chain alkane oxidizer archaea genomes from metagenomes of various origins.

Accession	PRJNA472146
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	ecological metagenomes[Taxonomy ID: 410657] unclassified sequences; metagenomes; ecological metagenomes
Publications	Borrel G et al., "Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea.", Nat Microbiol, 2019 Apr;4(4):603-613
Submission	Registration date: 19-Feb-2019 Institut Pasteur
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1043
WGS master	9
Genomic DNA	21
Protein Sequences	14693
Publications
PubMed	1
PMC	1
Other datasets
BioSample	14
Assembly	9

Assembly details:

Assembly level

Number of Assemblies

Scaffold

Contig

2
7
9

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_004212055.1		RXII00000000	SAMN10390736	NM4	Candidatus Methanodesulfokora washburnensis
GCA_004212075.1		RXIF00000000	SAMN10390728	NM1a	Candidatus Methanoliparum thermophilum
GCA_004212085.1		RXIL00000000	SAMN10390732	NM1b	Candidatus Methanolliviera hydrocarbonicum
GCA_004212145.1		RXIH00000000	SAMN10390735	Verst-YHS	Candidatus Methanomethylicota archaeon
GCA_004212035.1		RYFX00000000	SAMN10390737	Mnatro-ASL	Methanonatronarchaeia archaeon
GCA_004212135.1		RXIE00000000	SAMN10387997	ANME-1-THS	Methanophagales archaeon ANME-1-THS
GCA_004211975.1		RXIK00000000	SAMN10390739	ANME-2c-GOS	Methanosarcinales archaeon
GCA_004212095.1		RXIJ00000000	SAMN10390738	GoM-Arc1-GOS	Methanosarcinales archaeon
GCA_004212155.1		RXIG00000000	SAMN10390733	NM3	archaeon

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ecological metagenomes
ecological metagenomes
Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea

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