Clostridioides difficile (ID 448390) - BioProject

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Accession: PRJNA448390 ID: 448390

Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

See Genome Information for Clostridioides difficile

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Clostridium difficile whole genome shotgun sequencing

Accession	PRJNA448390
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Clostridioides difficile[Taxonomy ID: 1496] Bacteria; Bacillati; Bacillota; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile
Grants	"Methods for Multiscale and Integrative Characterization of Bacterial Epigenomes" (Grant ID R01 GM114472, National Institute of General Medical Sciences)
Submission	Registration date: 19-Jun-2019 Icahn School of Medicine at Mount Sinai
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	141
WGS master	28
Genomic DNA	8
Protein Sequences	133456
Other datasets
BioSample	36
Assembly	36
Supplementary data
Base modification	106

Assembly details:

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Assembly level

Number of Assemblies

Chromosome

Contig

Total

8
28
36

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_006408435.1	PZOU00000000		SAMN08832119	20265	Clostridioides difficile
GCA_006408415.1	PZOT00000000		SAMN08832118	21024	Clostridioides difficile
GCA_006408285.1	PZOO00000000		SAMN08832079	21025	Clostridioides difficile
GCA_006408375.1	PZOV00000000		SAMN08832126	20700	Clostridioides difficile
GCA_006408335.1	PZOS00000000		SAMN08832100	22457	Clostridioides difficile
GCA_006408325.1	PZOR00000000		SAMN08832096	20697	Clostridioides difficile
GCA_006408255.1	PZON00000000		SAMN08832075	020472	Clostridioides difficile
GCA_006408235.1	PZOM00000000		SAMN08832056	21026	Clostridioides difficile
GCA_006381115.1	PZRM00000000		SAMN08833207	20691	Clostridioides difficile
GCA_006381095.1	PZRN00000000		SAMN08833295	20710	Clostridioides difficile
GCA_006381075.1	PZRK00000000		SAMN08833176	21018	Clostridioides difficile
GCA_006381025.1	PZRH00000000		SAMN08833066	20481	Clostridioides difficile
GCA_006381045.1	PZRJ00000000		SAMN08833161	20486	Clostridioides difficile
GCA_006381005.1	PZRI00000000		SAMN08833156	20707	Clostridioides difficile
GCA_006380995.1	PZRG00000000		SAMN08832997	20479	Clostridioides difficile
GCA_006380975.1	PZRF00000000		SAMN08832996	21022	Clostridioides difficile
GCA_006380955.1	PZRE00000000		SAMN08832982	20483	Clostridioides difficile
GCA_006380915.1	PZRC00000000		SAMN08832794	20485	Clostridioides difficile
GCA_006380905.1	PZRD00000000		SAMN08832920	20478	Clostridioides difficile
GCA_006380895.1	PZRA00000000		SAMN08832765	20705	Clostridioides difficile
GCA_006380875.1	PZRB00000000		SAMN08832782	20916	Clostridioides difficile
GCA_006380835.1	PZQZ00000000		SAMN08832710	20922	Clostridioides difficile
GCA_006380825.1	PZQY00000000		SAMN08832650	20476	Clostridioides difficile
GCA_006379355.1	PZRL00000000		SAMN08833184	20690	Clostridioides difficile
GCA_006379335.1	PZQX00000000		SAMN08832630	20266	Clostridioides difficile
GCA_006454555.1	PZOQ00000000		SAMN08832092	22456	Clostridioides difficile
GCA_006454545.1	PZOP00000000		SAMN08832091	20475	Clostridioides difficile
GCA_006454575.1	PZOW00000000		SAMN08832200	20911	Clostridioides difficile
GCA_003597915.1		1	SAMN08833294	020711	Clostridioides difficile
GCA_003597895.1		1	SAMN08832949	020482	Clostridioides difficile
GCA_003597875.1		1	SAMN08832781	020477	Clostridioides difficile
GCA_003597855.1		1	SAMN08833206	020709	Clostridioides difficile
GCA_003597835.1		1	SAMN08833182	020696	Clostridioides difficile
GCA_003597815.1		1	SAMN08833165	020695	Clostridioides difficile
GCA_003597795.1		1	SAMN08833065	020688	Clostridioides difficile
GCA_003597775.1		1	SAMN08832090	020474	Clostridioides difficile

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Clostridioides difficile

Clostridioides difficile Genome sequencing and assembly

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