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Accession: PRJEB28457 ID: 572671

Klebsiella pneumoniae and Enterobacter cloacae whole-genome sequencing.

This study investigates longitudinal trends in population and antimicrobial resistance in Klebsiella pneumoniae and Enterobacter cloacae.
AccessionPRJEB28457
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 20-Sep-2019
WELLCOME SANGER INSTITUTE
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)25138
WGS master305
Protein Sequences1488723
Other datasets
BioSample305
Assembly305
Assembly details:
Assembly levelNumber of Assemblies
176
129
305
AssemblyLevelWGSBioSampleStrainTaxonomy
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_900559105.1ScaffoldUNXU00000000SAMEA2054821
2485STDY5438379
GCA_900558785.1ContigUNWK00000000SAMEA2053982
2485STDY5438345
GCA_900557955.1ContigUNTK00000000SAMEA2053856
2485STDY5438420
GCA_900566175.1ScaffoldUOUG00000000SAMEA2054040
2485STDY5438436
GCA_900557945.1ContigUNTD00000000SAMEA2054034
2485STDY5438418
GCA_900557935.1ContigUNTG00000000SAMEA2054834
2485STDY5438419
GCA_900557925.1ContigUNTF00000000SAMEA2053855
2485STDY5438417
GCA_900557915.1ContigUNTE00000000SAMEA2054833
2485STDY5438416
GCA_900557905.1ScaffoldUNTC00000000SAMEA2054033
2485STDY5438415
GCA_900557895.1ContigUNTB00000000SAMEA2054829
2485STDY5438404
GCA_900557885.1ContigUNSX00000000SAMEA2053996
2485STDY5438388
GCA_900557875.1ContigUNSZ00000000SAMEA2054830
2485STDY5438407
GCA_900557865.1ContigUNSV00000000SAMEA2054832
2485STDY5438413
GCA_900557855.1ScaffoldUNTA00000000SAMEA2053854
2485STDY5438414
GCA_900558025.1ContigUNTO00000000SAMEA2054915
2485STDY5438434
GCA_900558015.1ContigUNTM00000000SAMEA2054916
2485STDY5438437
GCA_900558005.1ContigUNTW00000000SAMEA2053861
2485STDY5438435
GCA_900557995.1ContigUNTL00000000SAMEA2054914
2485STDY5438431
GCA_900557985.1ScaffoldUNTJ00000000SAMEA2054036
2485STDY5438424
GCA_900557965.1ScaffoldUNTI00000000SAMEA2054038
2485STDY5438430
GCA_900557975.1ContigUNTH00000000SAMEA2054035
2485STDY5438421
GCA_900557845.1ContigUNSU00000000SAMEA2054828
2485STDY5438401
GCA_900558165.1ScaffoldUNUC00000000SAMEA2054922
2485STDY5438455
GCA_900557835.1ContigUNSY00000000SAMEA2053795
2485STDY5438402
GCA_900557815.1ScaffoldUNST00000000SAMEA2053999
2485STDY5438397
GCA_900557775.1ScaffoldUNSW00000000SAMEA2053793
2485STDY5438396
GCA_900557755.1ContigUNSS00000000SAMEA2054000
2485STDY5438400
GCA_900558305.1ScaffoldUNUT00000000SAMEA2053936
2485STDY5477957
GCA_900558255.1ScaffoldUNUL00000000SAMEA2053870
2485STDY5438468
GCA_900558245.1ContigUNUK00000000SAMEA2054051
2485STDY5438469
GCA_900558205.1ContigUNUI00000000SAMEA2053869
2485STDY5438465
GCA_900558195.1ContigUNUF00000000SAMEA2054049
2485STDY5438463
GCA_900558185.1ContigUNUE00000000SAMEA2054048
2485STDY5438460
GCA_900558175.1ContigUNUD00000000SAMEA2053868
2485STDY5438462
GCA_900558155.1ContigUNUA00000000SAMEA2053866
2485STDY5438453
GCA_900558145.1ScaffoldUNUB00000000SAMEA1964904
2485STDY5438459
GCA_900558135.1ScaffoldUNTY00000000SAMEA2054919
2485STDY5438446
GCA_900558115.1ScaffoldUNTV00000000SAMEA2054045
2485STDY5438451
GCA_900558105.1ContigUNTU00000000SAMEA2054043
2485STDY5438445
GCA_900558095.1ContigUNTR00000000SAMEA2054918
2485STDY5438443
GCA_900558085.1ContigUNTZ00000000SAMEA2053863
2485STDY5438444
GCA_900558075.1ContigUNTS00000000SAMEA2053862
2485STDY5438438
GCA_900558065.1ContigUNTT00000000SAMEA2054917
2485STDY5438440
GCA_900558055.1ContigUNTP00000000SAMEA1972512
2485STDY5438441
GCA_900558045.1ScaffoldUNTQ00000000SAMEA2054042
2485STDY5438442
GCA_900558375.1ScaffoldUNUX00000000SAMEA2053939
2485STDY5477966
GCA_900558385.1ScaffoldUNUY00000000SAMEA2054089
2485STDY5477967
GCA_900558335.1ScaffoldUNUR00000000SAMEA2054084
2485STDY5477952
GCA_900558345.1ScaffoldUNUV00000000SAMEA2054086
2485STDY5477958
GCA_900558355.1ScaffoldUNUU00000000SAMEA2053938
2485STDY5477963
GCA_900558365.1ScaffoldUNVA00000000SAMEA2054087
2485STDY5477961
GCA_900558315.1ContigUNUS00000000SAMEA2053935
2485STDY5477954
GCA_900558325.1ContigUNUQ00000000SAMEA2054935
2485STDY5477953
GCA_900558295.1ContigUNUP00000000SAMEA2053934
2485STDY5477948
GCA_900558285.1ContigUNUN00000000SAMEA2054082
2485STDY5477946
GCA_900558275.1ContigUNUM00000000SAMEA2054926
2485STDY5438467
GCA_900558265.1ContigUNUO00000000SAMEA2054927
2485STDY5438470
GCA_900558235.1ContigUNUJ00000000SAMEA2053875
2485STDY5477942
GCA_900558225.1ScaffoldUNUG00000000SAMEA2054050
2485STDY5438466
GCA_900558215.1ScaffoldUNUH00000000SAMEA2054925
2485STDY5438464
GCA_900558775.1ContigUNWM00000000SAMEA2054767
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GCA_900558765.1ContigUNWJ00000000SAMEA2053981
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GCA_900558755.1ScaffoldUNWI00000000SAMEA2053778
2485STDY5438341
GCA_900558745.1ScaffoldUNWG00000000SAMEA2053979
2485STDY5438336
GCA_900558735.1ContigUNWH00000000SAMEA2054766
2485STDY5438340
GCA_900558725.1ScaffoldUNWE00000000SAMEA2054765
2485STDY5438337
GCA_900558715.1ScaffoldUNWF00000000SAMEA2053977
2485STDY5438330
GCA_900558705.1ScaffoldUNWC00000000SAMEA2053724
2485STDY5438332
GCA_900558695.1ContigUNWB00000000SAMEA2053978
2485STDY5438333
GCA_900558685.1ContigUNWU00000000SAMEA2054764
2485STDY5438334
GCA_900558675.1ContigUNWD00000000SAMEA2053723
2485STDY5438329
GCA_900558665.1ScaffoldUNVY00000000SAMEA1966964
2485STDY5438328
GCA_900558655.1ScaffoldUNWA00000000SAMEA2053722
2485STDY5438326
GCA_900558885.1ScaffoldUNWW00000000SAMEA2053986
2485STDY5438357
GCA_900558895.1ContigUNXD00000000SAMEA2054813
2485STDY5438355
GCA_900558875.1ContigUNWV00000000SAMEA2053985
2485STDY5438354
GCA_900558965.1ContigUNXO00000000SAMEA2053988
2485STDY5438363
GCA_900558955.1ScaffoldUNXC00000000SAMEA2054816
2485STDY5438364
GCA_900558925.1ContigUNXA00000000SAMEA1973382
2485STDY5438359
GCA_900558915.1ContigUNWX00000000SAMEA2053987
2485STDY5438360
GCA_900558905.1ContigUNWY00000000SAMEA2054814
2485STDY5438358
GCA_900559095.1ContigUNXS00000000SAMEA2054822
2485STDY5438382
GCA_900559085.1ScaffoldUNXP00000000SAMEA2053788
2485STDY5438380
GCA_900559075.1ScaffoldUNXQ00000000SAMEA2053787
2485STDY5438377
GCA_900558985.1ContigUNXE00000000SAMEA2053989
2485STDY5438366
GCA_900558975.1ScaffoldUNXF00000000SAMEA2053784
2485STDY5438365
GCA_900559055.1ContigUNXM00000000SAMEA2053992
2485STDY5438375
GCA_900559045.1ScaffoldUNXK00000000SAMEA2054819
2485STDY5438373
GCA_900559035.1ContigUNXJ00000000SAMEA2054818
2485STDY5438370
GCA_900559025.1ContigUNXH00000000SAMEA2053786
2485STDY5438371
GCA_900559015.1ScaffoldUNXG00000000SAMEA2054817
2485STDY5438367
GCA_900559005.1ScaffoldUNXL00000000SAMEA2053785
2485STDY5438368
GCA_900558995.1ScaffoldUNXI00000000SAMEA2053990
2485STDY5438369
GCA_900558425.1ScaffoldUNVH00000000SAMEA2053950
2485STDY5478002
GCA_900559115.1ScaffoldUNXR00000000SAMEA2053994
2485STDY5438381
GCA_900558605.1ScaffoldUNVU00000000SAMEA2053906
2485STDY5438321
GCA_900558435.1ScaffoldUNVC00000000SAMEA2054756
2485STDY5438307
GCA_900558445.1ScaffoldUNVD00000000SAMEA2054755
2485STDY5438304
GCA_900558395.1ContigUNUW00000000SAMEA2053947
2485STDY5477990
GCA_900558405.1ContigUNUZ00000000SAMEA2054930
2485STDY5477938
GCA_900558415.1ContigUNVB00000000SAMEA1920554
2485STDY5478026
GCA_900558845.1ContigUNWQ00000000SAMEA2053984
2485STDY5438351
GCA_900558835.1ScaffoldUNWN00000000SAMEA2054769
2485STDY5438349
GCA_900558815.1ScaffoldUNWR00000000SAMEA2054770
2485STDY5438352
GCA_900558825.1ContigUNWO00000000SAMEA2053780
2485STDY5438347
GCA_900558805.1ContigUNWL00000000SAMEA2054768
2485STDY5438346
GCA_900558795.1ContigUNWP00000000SAMEA2053779
2485STDY5438344
GCA_900558865.1ContigUNWS00000000SAMEA2053781
2485STDY5438353
GCA_900558645.1ScaffoldUNVZ00000000SAMEA2053908
2485STDY5438327
GCA_900558635.1ContigUNVV00000000SAMEA2054762
2485STDY5438325
GCA_900558625.1ScaffoldUNVW00000000SAMEA2054761
2485STDY5438322
GCA_900558615.1ContigUNVT00000000SAMEA2053721
2485STDY5438323
GCA_900558595.1ScaffoldUNVS00000000SAMEA2053907
2485STDY5438324
GCA_900558575.1ContigUNVR00000000SAMEA2054760
2485STDY5438319
GCA_900558565.1ContigUNVQ00000000SAMEA2054759
2485STDY5438316
GCA_900558555.1ContigUNVP00000000SAMEA2053719
2485STDY5438317
GCA_900558535.1ScaffoldUNVO00000000SAMEA2053905
2485STDY5438315
GCA_900558525.1ContigUNVM00000000SAMEA2053718
2485STDY5438314
GCA_900558515.1ContigUNVL00000000SAMEA2053904
2485STDY5438312
GCA_900558505.1ContigUNVJ00000000SAMEA2054758
2485STDY5438313
GCA_900558495.1ScaffoldUNVI00000000SAMEA2053717
2485STDY5438311
GCA_900558475.1ScaffoldUNVF00000000SAMEA2053716
2485STDY5438308
GCA_900558465.1ContigUNVK00000000SAMEA1972921
2485STDY5438309
GCA_900558455.1ScaffoldUNVG00000000SAMEA2054757
2485STDY5438310
GCA_900538125.1ContigUNRY00000000SAMEA104225362
2485STDY7075091
GCA_900538115.1ContigUNRS00000000SAMEA104225364
2485STDY7075093
GCA_900558855.1ContigUNWT00000000SAMEA1969609
2485STDY5438350
GCA_900559065.1ContigUNXN00000000SAMEA1972464
2485STDY5438374
GCA_900558945.1ScaffoldUNXB00000000SAMEA2054815
2485STDY5438361
GCA_900558935.1ScaffoldUNWZ00000000SAMEA2053783
2485STDY5438362
GCA_900566165.1ContigUOUD00000000SAMEA2054836
2485STDY5438425
GCA_900558545.1ContigUNVN00000000SAMEA1964557
2485STDY5438318
GCA_900558585.1ContigUNVX00000000SAMEA2053720
2485STDY5438320
GCA_900558485.1ContigUNVE00000000SAMEA2053898
2485STDY5438291
GCA_900558035.1ContigUNTN00000000SAMEA2053791
2485STDY5438390
GCA_900558125.1ScaffoldUNTX00000000SAMEA2054921
2485STDY5438452
GCA_900538185.1ContigUNRX00000000SAMEA104216642
2485STDY7054541
GCA_900538175.1ContigUNRW00000000SAMEA104225369
2485STDY7075098
GCA_900538165.1ContigUNRV00000000SAMEA104225355
2485STDY7075084
GCA_900538155.1ContigUNRT00000000SAMEA104225356
2485STDY7075085
GCA_900538145.1ContigUNSA00000000SAMEA104225360
2485STDY7075089
GCA_900538135.1ContigUNRU00000000SAMEA104225358
2485STDY7075087
GCA_900559175.1ScaffoldUNXZ00000000SAMEA1713080
2485STDY5438250
GCA_900559185.1ScaffoldUNXY00000000SAMEA1713111
2485STDY5438234
GCA_900559195.1ScaffoldUNYA00000000SAMEA1713093
2485STDY5438242
GCA_900559165.1ScaffoldUNXX00000000SAMEA1713089
2485STDY5438210
GCA_900559155.1ScaffoldUNYB00000000SAMEA1713013
2485STDY5438202
GCA_900559145.1ScaffoldUNXV00000000SAMEA1713103
2485STDY5438218
GCA_900559135.1ScaffoldUNXW00000000SAMEA1713015
2485STDY5438226
GCA_900559125.1ScaffoldUNXT00000000SAMEA1713066
2485STDY5438194
GCA_900538105.1ContigUNRZ00000000SAMEA104225357
2485STDY7075086
GCA_900559785.1ScaffoldUOAH00000000SAMEA1713023
2485STDY5438286
GCA_900559695.1ScaffoldUNZY00000000SAMEA1713131
2485STDY5438238
GCA_900559685.1ScaffoldUNZZ00000000SAMEA1713021
2485STDY5438230
GCA_900559665.1ContigUNZW00000000SAMEA1713117
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GCA_900559655.1ScaffoldUNZV00000000SAMEA1713005
2485STDY5438198
GCA_900559645.1ScaffoldUNZT00000000SAMEA1713011
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GCA_900559625.1ScaffoldUNZU00000000SAMEA1712987
2485STDY5438277
GCA_900559615.1ContigUNZQ00000000SAMEA1920551
2485STDY5478021
GCA_900559605.1ScaffoldUNZO00000000SAMEA1712950
2485STDY5438261
GCA_900559595.1ScaffoldUNZR00000000SAMEA1713037
2485STDY5438269
GCA_900559585.1ScaffoldUNZP00000000SAMEA1713017
2485STDY5438253
GCA_900559575.1ContigUNZM00000000SAMEA1920547
2485STDY5478020
GCA_900559545.1ScaffoldUNZK00000000SAMEA1712983
2485STDY5438229
GCA_900559535.1ScaffoldUNZN00000000SAMEA1713031
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GCA_900559525.1ScaffoldUNZI00000000SAMEA1713061
2485STDY5438205
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2485STDY5438268
GCA_900559775.1ScaffoldUOAG00000000SAMEA1713049
2485STDY5438199
GCA_900559765.1ScaffoldUOAI00000000SAMEA1920550
2485STDY5478023
GCA_900559755.1ContigUOAF00000000SAMEA1712944
2485STDY5438207
GCA_900559745.1ScaffoldUOAE00000000SAMEA1713099
2485STDY5438270
GCA_900559735.1ScaffoldUOAD00000000SAMEA1713133
2485STDY5438278
GCA_900559725.1ScaffoldUOAB00000000SAMEA1713039
2485STDY5438254
GCA_900559715.1ScaffoldUOAC00000000SAMEA1713009
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GCA_900559905.1ScaffoldUOAZ00000000SAMEA1712965
2485STDY5438208
GCA_900559505.1ContigUNZH00000000SAMEA1712941
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GCA_900559375.1ScaffoldUNYT00000000SAMEA1713001
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GCA_900559365.1ScaffoldUNYP00000000SAMEA1713082
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GCA_900559325.1ScaffoldUNYR00000000SAMEA1712956
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GCA_900559305.1ScaffoldUNYL00000000SAMEA1712985
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GCA_900559285.1ScaffoldUNYM00000000SAMEA1713078
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GCA_900559275.1ScaffoldUNYK00000000SAMEA1712959
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GCA_900559265.1ScaffoldUNYI00000000SAMEA1713127
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GCA_900559255.1ScaffoldUNYE00000000SAMEA1713135
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GCA_900560055.1ScaffoldUOBM00000000SAMEA1713019
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GCA_900559985.1ScaffoldUOBD00000000SAMEA1713059
2485STDY5438217
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GCA_900560465.1ScaffoldUOCX00000000SAMEA2053945
2485STDY5477984
GCA_900560455.1ContigUOCV00000000SAMEA2054095
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GCA_900560645.1ContigUODQ00000000SAMEA2053867
2485STDY5438456
GCA_900560445.1ScaffoldUOCW00000000SAMEA2055006
2485STDY5477986
GCA_900560425.1ScaffoldUOCT00000000SAMEA2055004
2485STDY5477980
GCA_900560415.1ScaffoldUOCU00000000SAMEA2055003
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GCA_900560385.1ScaffoldUOCQ00000000SAMEA2054920
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GCA_900560375.1ScaffoldUOCP00000000SAMEA2054039
2485STDY5438433
GCA_900560365.1ContigUOCO00000000SAMEA2053941
2485STDY5477972
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2485STDY5477970
GCA_900560345.1ScaffoldUOCI00000000SAMEA2054085
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2485STDY5477969
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GCA_900560325.1ScaffoldUOCK00000000SAMEA2054936
2485STDY5477956
GCA_900560315.1ContigUOCH00000000SAMEA2053859
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