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Links from Protein

Accession: PRJNA624897 ID: 624897

Escherichia coli

Escherichia coli Genome sequencing and assembly

See Genome Information for Escherichia coli
This study explores genomic diversity in commensal E. coli isolates from healthy college students. More...
AccessionPRJNA624897
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
PublicationsStephens C et al., "F Plasmids Are the Major Carriers of Antibiotic Resistance Genes in Human-Associated Commensal Escherichia coli.", mSphere, 2020 Aug 5;5(4)
SubmissionRegistration date: 27-May-2020
Santa Clara University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)205
WGS master1
Genomic DNA204
Protein Sequences219447
Publications
PubMed1
PMC1
Other datasets
BioSample50
Assembly49
Assembly details:
Assembly levelNumber of Assemblies
42
4
1
47
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_017815815.1Complete genomeSAMN14609767
SCU-101
GCA_012934815.1Complete genomeSAMN14609802
SCU-486
GCA_012934785.1Complete genomeSAMN14609800
SCU-484
GCA_012934765.1Complete genomeSAMN14609795
SCU-387
GCA_012934735.1Complete genomeSAMN14609794
SCU-318
GCA_012934715.1Complete genomeSAMN14609793
SCU-313
GCA_012934695.1Complete genomeSAMN14609790
SCU-301
GCA_012934675.1Complete genomeSAMN14609787
SCU-152
GCA_012934635.1Complete genomeSAMN14609784
SCU-124
GCA_012934615.1Complete genomeSAMN14609783
SCU-123
GCA_012934595.1Complete genomeSAMN14609782
SCU-122
GCA_012934575.1Complete genomeSAMN14609779
SCU-118
GCA_012934555.1Complete genomeSAMN14609778
SCU-116
GCA_012934535.1Complete genomeSAMN14609776
SCU-112
GCA_012934515.1Complete genomeSAMN14609775
SCU-111
GCA_012934495.1Complete genomeSAMN14609774
SCU-109
GCA_012934475.1Complete genomeSAMN14609773
SCU-108
GCA_012934455.1Complete genomeSAMN14609770
SCU-105
GCA_012934435.1Complete genomeSAMN14609768
SCU-102
GCA_013085865.1Complete genomeSAMN14609792
SCU-308
GCA_013085025.1Complete genomeSAMN14609798
SCU-482
GCA_013084945.1Complete genomeSAMN14609791
SCU-306
GCA_013085205.1Complete genomeSAMN14609801
SCU-485
GCA_013085185.1Complete genomeSAMN14609771
SCU-106
GCA_013178915.1ContigJABLYB000000000
SAMN14943540
SCU-481
GCA_012934655.2Complete genomeSAMN14609785
SCU-125
GCA_013315755.1Complete genomeSAMN14943536
SCU-316
GCA_013315735.1Complete genomeSAMN14943543
SCU-115
GCA_013315715.1Complete genomeSAMN14943544
SCU-171
GCA_013315695.1Complete genomeSAMN14943545
SCU-172
GCA_013315675.1Complete genomeSAMN14943547
SCU-176
GCA_013315995.1Complete genomeSAMN14609769
SCU-104
GCA_013315975.1Complete genomeSAMN14609777
SCU-113
GCA_013315935.1Complete genomeSAMN14609780
SCU-120
GCA_013315915.1Complete genomeSAMN14609781
SCU-121
GCA_013315895.1ChromosomeSAMN14609786
SCU-147
GCA_013315875.1Complete genomeSAMN14609796
SCU-390
GCA_013315855.1Complete genomeSAMN14609797
SCU-479
GCA_013315835.1Complete genomeSAMN14609799
SCU-483
GCA_013341375.1Complete genomeSAMN14943534
SCU-103
GCA_013341355.1Complete genomeSAMN14943541
SCU-487
GCA_013341335.1Complete genomeSAMN14943542
SCU-488
GCA_013344585.1ChromosomeSAMN14943535
SCU-182
GCA_013347985.1ChromosomeSAMN14609788
SCU-164
GCA_013368055.1Complete genomeSAMN14943537
SCU-321
GCA_013358385.1ChromosomeSAMN14943538
SCU-397
GCA_013085905.3Complete genomeSAMN14609789
SCU-204

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