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Accession: PRJNA855134 ID: 855134

Fusarium spp.

Genome sequencing and assembly of Fusarium species associated with Citrus

Cultured isolates of Fusarium species from diseased and healthy Citrus.

Accession	PRJNA855134
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Fusarium[Taxonomy ID: 5506] Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium
Grants	"CAP: Combining Cultural and Genetic Approaches for Grove Success to Unravel and Enhance Resistance/Tolerance to Huanglongbing" (Grant ID CA-R-PPA-5220-CG, US Department of Agriculture - National Institute of Food and Agriculture)
Submission	Registration date: 24-Jan-2023 University of California, Riverside
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3840
WGS master	18
SRA Experiments	20
Protein Sequences	270410
Other datasets
BioSample	18
Assembly	18

Assembly details:

Assembly level

Number of Assemblies

Scaffold

Contig

16
2
18

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_027945365.1		JAOQBH000000000	SAMN30354193	CF00095	Fusarium equiseti
GCA_027945505.1		JAOQAV000000000	SAMN30354180	A02	Fusarium falciforme
GCA_027945395.1		JAOQBJ000000000	SAMN30354195	CF00175	Fusarium falciforme
GCA_027945515.1		JAOQAW000000000	SAMN30354181	A04	Fusarium falciforme
GCA_027945495.1		JAOQAU000000000	SAMN30354179	A01-2	Fusarium falciforme
GCA_027945245.1		JAPDHF000000000	SAMN30354187	CF00143	Fusarium irregulare
GCA_027945235.1		JAOQBA000000000	SAMN30354185	CF00137	Fusarium irregulare
GCA_027945555.1		JAOQAY000000000	SAMN30354183	CF00132	Fusarium oxysporum
GCA_027945535.1		JAOQAX000000000	SAMN30354182	CF00115	Fusarium oxysporum
GCA_027945315.1		JAOQBF000000000	SAMN30354191	CF00161	Fusarium oxysporum
GCA_027945255.1		JAOQBC000000000	SAMN30354188	CF00144	Fusarium oxysporum
GCA_027945275.1		JAOQBD000000000	SAMN30354189	CF00145	Fusarium oxysporum
GCA_027945405.1		JAOQBI000000000	SAMN30354194	CF00159	Fusarium oxysporum
GCA_027945335.1		JAOQBG000000000	SAMN30354192	CF00165	Fusarium oxysporum
GCA_027945305.1		JAOQBE000000000	SAMN30354190	CF00160	Fusarium oxysporum
GCA_027945265.1		JAOQBB000000000	SAMN30354186	CF00141	Fusarium oxysporum
GCA_027945525.1		JAOQAT000000000	SAMN30354178	A01-1	Fusarium solani
GCA_027945595.1		JAOQAZ000000000	SAMN30354184	CF00136	Fusarium torreyae

SRA Data Details

Parameter	Value
Data volume, Gbases	30
Data volume, Mbytes	11720

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Fusarium spp.
Fusarium spp.
Genome sequencing and assembly of Fusarium species associated with Citrus

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