Exophiala dermatitidis (ID 628510) - BioProject

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Accession: PRJNA628510 ID: 628510

Exophiala dermatitidis

Exophiala dermatitidis population sequencing from a CF patient

See Genome Information for Exophiala dermatitidis

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12 additional projects are related by organism.

Whole genome sequencing analysis of individual Exophiala dermatitis strains isolated from the lungs of a single individual with cystic fibrosis (CF), was used to assess heterogeneity within a single lung infection.

Accession	PRJNA628510
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Exophiala dermatitidis[Taxonomy ID: 5970] Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Exophiala; Exophiala dermatitidis
Grants	"Evolved Heterogeneity Contributes to Chronic Fungal Lung Infections" (Grant ID R01 AI127548, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 26-Jan-2023 University of California, Riverside
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1249
WGS master	23
SRA Experiments	26
Protein Sequences	216511
Other datasets
BioSample	23
Assembly	23

Assembly details:

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Number of Assemblies

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Total

23
23

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_030028065.1	JAJJBZ000000000	SAMN15064423	Ex22	Exophiala dermatitidis
GCA_030028025.1	JAJGCB000000000	SAMN15064409	Ex8	Exophiala dermatitidis
GCA_028023995.1	JAJGCD000000000	SAMN15064407	Ex6	Exophiala dermatitidis
GCA_028024505.1	JAJGCH000000000	SAMN15064403	Ex2	Exophiala dermatitidis
GCA_028024475.1	JAJGCG000000000	SAMN15064404	Ex3	Exophiala dermatitidis
GCA_028025245.1	JAJGCI000000000	SAMN15064402	Ex1	Exophiala dermatitidis
GCA_028024355.1	JAJGCF000000000	SAMN15064405	DCF04	Exophiala dermatitidis
GCA_028024125.1	JAJGCE000000000	SAMN15064406	Ex5	Exophiala dermatitidis
GCA_028027445.1	JAJGBW000000000	SAMN15064415	Ex14	Exophiala dermatitidis
GCA_028026945.1	JAJJCF000000000	SAMN15064416	Ex15	Exophiala dermatitidis
GCA_028026935.1	JAJJCD000000000	SAMN15064418	Ex17	Exophiala dermatitidis
GCA_028026245.1	JAJJCC000000000	SAMN15064419	Ex18	Exophiala dermatitidis
GCA_028026235.1	JAJJCB000000000	SAMN15064420	Ex19	Exophiala dermatitidis
GCA_028025295.1	JAJGBU000000000	SAMN15064424	Ex23	Exophiala dermatitidis
GCA_028025565.1	JAJGBV000000000	SAMN15064422	Ex21	Exophiala dermatitidis
GCA_028027615.1	JAJGBX000000000	SAMN15064414	Ex13	Exophiala dermatitidis
GCA_028028335.1	JAJGCC000000000	SAMN15064408	Ex7	Exophiala dermatitidis
GCA_028026005.1	JAJJCA000000000	SAMN15064421	Ex20	Exophiala dermatitidis
GCA_028028305.1	JAJGCA000000000	SAMN15064410	Ex9	Exophiala dermatitidis
GCA_028028245.1	JAJGBZ000000000	SAMN15064411	Ex10	Exophiala dermatitidis
GCA_028028135.1	JAJGBY000000000	SAMN15064412	Ex11	Exophiala dermatitidis
GCA_028027665.1	JAJJCG000000000	SAMN15064413	Ex12	Exophiala dermatitidis
GCA_028027435.1	JAJJCE000000000	SAMN15064417	Ex16	Exophiala dermatitidis

SRA Data Details

Parameter	Value
Data volume, Gbases	41
Data volume, Mbytes	17203

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Exophiala dermatitidis

Exophiala dermatitidis population sequencing from a CF patient

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