ID 867151 - BioProject

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Accession: PRJNA867151 ID: 867151

Long read sequencing of different Penicillium spp.

High molecular weight DNA extraction of different Penicillium spp. followed by long read sequencing and de novo assembling.

Accession	PRJNA867151
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Petersen C et al., "Comparative genomic study of the Penicillium genus elucidates a diverse pangenome and 15 lateral gene transfer events.", IMA Fungus, 2023 Feb 1;14(1):3 Published online: Petersen C et al., "Comparative genomic study of the Penicillium genus elucidates a diverse pangenome and 15 lateral gene transfer events", IMA Fungus, 2023;14(1)
Submission	Registration date: 8-Aug-2022 Aalborg University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1087
WGS master	93
SRA Experiments	93
Protein Sequences	1107418
Publications
PubMed	1
PMC	1
Other datasets
BioSample	93
Assembly	93

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

93
93

Assembly	WGS	BioSample	Taxonomy
GCA_028826965.1	JAPMSZ000000000	SAMN30185292	Penicillium alfredii
GCA_028827245.1	JAPZBL000000000	SAMN30185293	Penicillium angulare
GCA_028826755.1	JAPQKH000000000	SAMN30185294	Penicillium angulare
GCA_028974205.1	JAPZBM000000000	SAMN30185295	Penicillium antarcticum
GCA_028826775.1	JAPQKI000000000	SAMN30185296	Penicillium argentinense
GCA_028826765.1	JAPQKK000000000	SAMN30185301	Penicillium atrosanguineum
GCA_028826785.1	JAPQKJ000000000	SAMN30185299	Penicillium atrosanguineum
GCA_028827265.1	JAPZBN000000000	SAMN30185297	Penicillium atrosanguineum
GCA_028827005.1	JAPZBO000000000	SAMN30185298	Penicillium atrosanguineum
GCA_028826915.1	JAPQKL000000000	SAMN30185302	Penicillium bovifimosum
GCA_028827255.1	JAPZBQ000000000	SAMN30185304	Penicillium brevicompactum
GCA_028827555.1	JAPZBP000000000	SAMN30185303	Penicillium brevicompactum
GCA_028827515.1	JAPZBR000000000	SAMN30185305	Penicillium brevicompactum
GCA_028826845.1	JAPQKN000000000	SAMN30185312	Penicillium canariense
GCA_028829005.1	JAQJZW000000000	SAMN30185376	Penicillium canescens
GCA_028828825.1	JAQJZP000000000	SAMN30185311	Penicillium canescens
GCA_028828795.1	JAQJZO000000000	SAMN30185310	Penicillium canescens
GCA_028828765.1	JAQJZN000000000	SAMN30185308	Penicillium canescens
GCA_028828745.1	JAQJZM000000000	SAMN30185306	Penicillium canescens
GCA_028828735.1	JAQJZL000000000	SAMN30185307	Penicillium canescens
GCA_028829745.1	JAQKAC000000000	SAMN30185309	Penicillium canescens
GCA_028828875.1	JAQJZR000000000	SAMN30185350	Penicillium capsulatum
GCA_028826875.1	JAPQKO000000000	SAMN30185313	Penicillium capsulatum
GCA_028827025.1	JAPZBS000000000	SAMN30185314	Penicillium cataractarum
GCA_028826995.1	JAPZBX000000000	SAMN30185356	Penicillium cf. griseofulvum
GCA_028827235.1	JAPZBY000000000	SAMN30185358	Penicillium cf. griseofulvum
GCA_028974015.1	JAPQKP000000000	SAMN30185357	Penicillium cf. griseofulvum
GCA_028974045.1	JAPQKQ000000000	SAMN30185316	Penicillium cf. viridicatum
GCA_028974085.1	JAPQKS000000000	SAMN30185315	Penicillium chermesinum
GCA_028828985.1	JAQJZV000000000	SAMN30185372	Penicillium chermesinum
GCA_028828955.1	JAQJZU000000000	SAMN30185371	Penicillium chrysogenum
GCA_028827035.1	JAPQKU000000000	SAMN30185319	Penicillium chrysogenum
GCA_028827015.1	JAPVEB000000000	SAMN30185318	Penicillium chrysogenum
GCA_028826945.1	JAPVED000000000	SAMN30185317	Penicillium chrysogenum
GCA_028974065.1	JAPQKR000000000	SAMN30185320	Penicillium cinerascens
GCA_028827155.1	JAPQKT000000000	SAMN30185321	Penicillium citrinum
GCA_028827145.1	JAPZBT000000000	SAMN30185322	Penicillium concentricum
GCA_028826855.1	JAPQKM000000000	SAMN30185323	Penicillium coprophilum
GCA_028827165.1	JAPZBU000000000	SAMN30185324	Penicillium cosmopolitanum
GCA_028827405.1	JAPZBV000000000	SAMN30185325	Penicillium crustosum
GCA_028827525.1	JAPVEA000000000	SAMN30185326	Penicillium daleae
GCA_028827375.1	JAPWDO000000000	SAMN30185327	Penicillium desertorum
GCA_028827545.1	JAPWDQ000000000	SAMN30185328	Penicillium diatomitis
GCA_028827855.1	JAPWDR000000000	SAMN30185329	Penicillium expansum
GCA_028828255.1	JAPWDS000000000	SAMN30185330	Penicillium fimorum
GCA_028827385.1	JAQIZX000000000	SAMN30185331	Penicillium freii
GCA_028827865.1	JAQIZZ000000000	SAMN30185333	Penicillium frequentans
GCA_028828275.1	JAQIZY000000000	SAMN30185332	Penicillium frequentans
GCA_028828675.1	JAQJZK000000000	SAMN30185337	Penicillium herquei
GCA_028828265.1	JAQJVJ000000000	SAMN30185336	Penicillium herquei
GCA_028827645.1	JAQJAC000000000	SAMN30185339	Penicillium hetheringtonii
GCA_028827665.1	JAQJAD000000000	SAMN30185340	Penicillium hispanicum
GCA_028827395.1	JAQJAE000000000	SAMN30185341	Penicillium hordei
GCA_028827675.1	JAQJAF000000000	SAMN30185342	Penicillium lagena
GCA_028828245.1	JAQJAG000000000	SAMN30185344	Penicillium lividum
GCA_028827875.1	JAQJAI000000000	SAMN30185346	Penicillium longicatenatum
GCA_028827895.1	JAQJAH000000000	SAMN30185345	Penicillium longicatenatum
GCA_028827695.1	JAQJAJ000000000	SAMN30185347	Penicillium maclennaniae
GCA_028827735.1	JAQJAK000000000	SAMN30185348	Penicillium macrosclerotiorum
GCA_028828285.1	JAQJAL000000000	SAMN30185349	Penicillium majusculum
GCA_028828335.1	JAQJAN000000000	SAMN30185352	Penicillium malachiteum
GCA_028827825.1	JAQJAO000000000	SAMN30185353	Penicillium malachiteum
GCA_028827775.1	JAQJAM000000000	SAMN30185351	Penicillium malachiteum
GCA_028828005.1	JAQJAP000000000	SAMN30185354	Penicillium manginii
GCA_028829835.1	JAQJZX000000000	SAMN30185355	Penicillium mononematosum
GCA_028828085.1	JAQJAQ000000000	SAMN30185359	Penicillium nucicola
GCA_028828045.1	JAQJAR000000000	SAMN30185360	Penicillium odoratum
GCA_028828445.1	JAQJAS000000000	SAMN30185361	Penicillium paradoxum
GCA_028828465.1	JAQJAT000000000	SAMN30185363	Penicillium psychrosexuale
GCA_028828015.1	JAQJAU000000000	SAMN30185364	Penicillium pulvis
GCA_028828495.1	JAQJAV000000000	SAMN30185365	Penicillium riverlandense
GCA_028829455.1	JAQJAW000000000	SAMN30185366	Penicillium robsamsonii
GCA_028828505.1	JAQKAG000000000	SAMN30185369	Penicillium rubens
GCA_028828025.1	JAQKAF000000000	SAMN30185368	Penicillium rubens
GCA_028829775.1	JAQJZT000000000	SAMN30185370	Penicillium samsonianum
GCA_028829755.1	JAQKAH000000000	SAMN30185373	Penicillium solitum
GCA_028829465.1	JAQKAI000000000	SAMN30185374	Penicillium soppii
GCA_028827225.1	JAPZBW000000000	SAMN30185338	Penicillium sp. CMV-2018d
GCA_028827535.1	JAQJAA000000000	SAMN30185334	Penicillium sp. DV-2018c
GCA_028827425.1	JAQJAB000000000	SAMN30185335	Penicillium sp. DV-2018c
GCA_028828865.1	JAQJZQ000000000	SAMN30185343	Penicillium sp. IBT 16267x
GCA_028828935.1	JAQJZS000000000	SAMN30185367	Penicillium sp. IBT 18751x
GCA_028827885.1	JAPWDP000000000	SAMN30185300	Penicillium sp. IBT 31633x
GCA_028828895.1	JAQKAT000000000	SAMN30185362	Penicillium sp. IBT 35674x
GCA_028828155.1	JAQKAJ000000000	SAMN30185375	Penicillium subrubescens
GCA_028829675.1	JAQKAK000000000	SAMN30185377	Penicillium tannophilum
GCA_028828555.1	JAQKAL000000000	SAMN30185378	Penicillium taxi
GCA_028828565.1	JAQKAN000000000	SAMN30185380	Penicillium verhagenii
GCA_028828195.1	JAQKAM000000000	SAMN30185379	Penicillium verhagenii
GCA_028828655.1	JAQKAO000000000	SAMN30185381	Penicillium verrucosum
GCA_028828185.1	JAQKAP000000000	SAMN30185382	Penicillium viridicatum
GCA_028829585.1	JAQKAQ000000000	SAMN30185383	Penicillium vulpinum
GCA_028829765.1	JAQKAR000000000	SAMN30185384	Penicillium waksmanii

SRA Data Details

Parameter	Value
Data volume, Gbases	293
Data volume, Tbytes	0.26

Related Project Category: RefseqGenbank

PRJNA973687 : Long read sequencing of different Penicillium spp.

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Long read sequencing of different Penicillium spp.

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