bioreactor metagenome (ID 1063047) - BioProject

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Accession: PRJDB16196 ID: 1063047

bioreactor metagenome

Metagenomic data of anammox consortia fed with nitrous oxide as an additional electron acceptor

This project contains NGS data obtained by metagenomic sequencing. We aimed to investigate the effect of N2O exposure on the bacterial community structure of the Anammox consortium. More...

Accession	PRJDB16196
Data Type	Genome sequencing
Scope	Multispecies
Organism	bioreactor metagenome[Taxonomy ID: 1076179] unclassified sequences; metagenomes; ecological metagenomes; bioreactor metagenome
Publications	Oba K et al., "Quest for Nitrous Oxide-reducing Bacteria Present in an Anammox Biofilm Fed with Nitrous Oxide.", Microbes Environ, 2024;39(1)
Grants	"Revealing the ecophysiologies of nitrous oxide-reducing bacteria towards the mitigation of greenhouse gas emissions in advanced nitrogen removal processes for wastewater treatment" (Grant ID 20KK0243, the Japanese Society for the Promotion of Science)
Submission	Registration date: 9-Jan-2024 Terada and Riya Laboratory, Chemical Engineering, Depertment of Technology, Tokyo University of Agriculture and Technology

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	8752
WGS master	54
SRA Experiments	3
Protein Sequences	189518
Publications
PubMed	1
PMC	1
Other datasets
BioSample	57
Assembly	54

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

33
21
54

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_045862915.1	BTVE00000000	SAMD00645954	AMX-MBFR-57	Acidimicrobiia bacterium
GCA_045862935.1	BTUT00000000	SAMD00645955	AMX-MBFR-46	Acidimicrobiia bacterium
GCA_045862895.1	BTUO00000000	SAMD00645953	AMX-MBFR-36	Acidobacteriota bacterium
GCA_045864315.1	BTVN00000000	SAMD00645999	AMX-MBFR-6	Betaproteobacteria bacterium
GCA_045863995.1	BTVO00000000	SAMD00645994	AMX-MBFR-72	Betaproteobacteria bacterium
GCA_045864275.1	BTUQ00000000	SAMD00645998	AMX-MBFR-42	Burkholderiales bacterium
GCA_045864155.1	BTVA00000000	SAMD00645997	AMX-MBFR-52	Burkholderiales bacterium
GCA_045863215.1	BTUB00000000	SAMD00645969	AMX-MBFR-12	Candidatus Babeliales bacterium
GCA_045863475.1	BTUR00000000	SAMD00645983	AMX-MBFR-44	Candidatus Campbellbacteria bacterium
GCA_045864395.1	BTUL00000000	SAMD00646000	AMX-MBFR-31	Candidatus Desulfobacillus denitrificans
GCA_045863435.1	BTVQ00000000	SAMD00645981	AMX-MBFR-75	Candidatus Hinthialibacteria bacterium
GCA_045863335.1	BTVY00000000	SAMD00645976	AMX-MBFR-82	Candidatus Hydrogenedentota bacterium
GCA_045863315.1	BTUX00000000	SAMD00645975	AMX-MBFR-4	Candidatus Hydrogenedentota bacterium
GCA_045863295.1	BTWA00000000	SAMD00645974	AMX-MBFR-84	Candidatus Hydrogenedentota bacterium
GCA_045863495.1	BTUE00000000	SAMD00645984	AMX-MBFR-17	Candidatus Jettenia caeni
GCA_045863455.1	BTUD00000000	SAMD00645982	AMX-MBFR-16	Candidatus Uhrbacteria bacterium
GCA_045863235.1	BTUM00000000	SAMD00645970	AMX-MBFR-33	Candidatus Xenobia bacterium
GCA_045863015.1	BTVU00000000	SAMD00645959	AMX-MBFR-79	Chitinophagaceae bacterium
GCA_045863055.1	BTUW00000000	SAMD00645961	AMX-MBFR-49	Chlorobiota bacterium
GCA_045863195.1	BTUI00000000	SAMD00645968	AMX-MBFR-23	Chloroflexota bacterium
GCA_045863135.1	BTVH00000000	SAMD00645965	AMX-MBFR-60	Chloroflexota bacterium
GCA_045862975.1	BTUF00000000	SAMD00645957	AMX-MBFR-19	Chthonomonadaceae bacterium
GCA_045862995.1	BTVX00000000	SAMD00645958	AMX-MBFR-81	Chthonomonas sp.
GCA_045863155.1	BTWB00000000	SAMD00645966	AMX-MBFR-85	Dehalococcoides mccartyi
GCA_045863175.1	BTVW00000000	SAMD00645967	AMX-MBFR-80	Dehalococcoidia bacterium
GCA_045862955.1	BTVI00000000	SAMD00645956	AMX-MBFR-61	Fimbriimonadales bacterium
GCA_045864455.1	BTUS00000000	SAMD00646001	AMX-MBFR-45	Gammaproteobacteria bacterium
GCA_045863275.1	BTVB00000000	SAMD00645973	AMX-MBFR-53	Gemmatimonadota bacterium
GCA_045863255.1	BTVC00000000	SAMD00645972	AMX-MBFR-55	Gemmatimonadota bacterium
GCA_045863115.1	BTVM00000000	SAMD00645964	AMX-MBFR-68	Ignavibacteria bacterium
GCA_045863035.1	BTUV00000000	SAMD00645960	AMX-MBFR-48	Ignavibacteriales bacterium
GCA_045863095.1	BTUZ00000000	SAMD00645963	AMX-MBFR-51	Ignavibacteriota bacterium
GCA_045863075.1	BTUY00000000	SAMD00645962	AMX-MBFR-50	Ignavibacterium album
GCA_045864915.1	BTUJ00000000	SAMD00646007	AMX-MBFR-25	Lysobacterales bacterium
GCA_045863355.1	BTUN00000000	SAMD00645977	AMX-MBFR-34	Myxococcaceae bacterium
GCA_045863395.1	BTVJ00000000	SAMD00645979	AMX-MBFR-64	Myxococcales bacterium
GCA_045864525.1	BTWC00000000	SAMD00646002	AMX-MBFR-8	Nevskiales bacterium
GCA_045863415.1	BTVL00000000	SAMD00645980	AMX-MBFR-67	Nitrospira sp.
GCA_045863935.1	BTVP00000000	SAMD00645993	AMX-MBFR-74	Parvibaculum sp.
GCA_045863535.1	BTVF00000000	SAMD00645986	AMX-MBFR-58	Phycisphaerae bacterium
GCA_045863715.1	BTUH00000000	SAMD00645990	AMX-MBFR-22	Phycisphaerae bacterium
GCA_045863605.1	BTVZ00000000	SAMD00645989	AMX-MBFR-83	Phycisphaerae bacterium
GCA_045863575.1	BTUC00000000	SAMD00645988	AMX-MBFR-13	Phycisphaerae bacterium
GCA_045863515.1	BTVS00000000	SAMD00645985	AMX-MBFR-77	Phycisphaerales bacterium
GCA_045863765.1	BTUG00000000	SAMD00645991	AMX-MBFR-20	Planctomycetia bacterium
GCA_045863555.1	BTUU00000000	SAMD00645987	AMX-MBFR-47	Planctomycetota bacterium
GCA_045863855.1	BTVV00000000	SAMD00645992	AMX-MBFR-7	Planctomycetota bacterium
GCA_045863375.1	BTVD00000000	SAMD00645978	AMX-MBFR-56	Polyangiaceae bacterium
GCA_045864635.1	BTUK00000000	SAMD00646003	AMX-MBFR-26	Porticoccaceae bacterium
GCA_045864775.1	BTVR00000000	SAMD00646005	AMX-MBFR-76	Pseudomonadota bacterium
GCA_045864015.1	BTVK00000000	SAMD00645995	AMX-MBFR-66	Pseudomonadota bacterium
GCA_045864815.1	BTVG00000000	SAMD00646006	AMX-MBFR-59	Rhodanobacteraceae bacterium
GCA_045864135.1	BTVT00000000	SAMD00645996	AMX-MBFR-78	Rubrivivax sp.
GCA_045864705.1	BTUP00000000	SAMD00646004	AMX-MBFR-37	Steroidobacteraceae bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	33
Data volume, Mbytes	12299

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bioreactor metagenome

Metagenomic data of anammox consortia fed with nitrous oxide as an additional electron acceptor

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