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Accession: PRJEB2812 ID: 204380

Genomic characterisation of early UK MRSA isolates

We identified mutated genes in highly resistant subpopulations of methicillin-resistant Staphylococcus aureus (MRSA) that are most likely responsible for the historic failure of the ?-lactam family of antibiotics as therapeutic agents against these important pathogens. More...
AccessionPRJEB2812
Data TypeGenome sequencing and assembly
ScopeMonoisolate
PublicationsDordel J et al., "Novel determinants of antibiotic resistance: identification of mutated loci in highly methicillin-resistant subpopulations of methicillin-resistant Staphylococcus aureus.", mBio, 2014 Apr 8;5(2):e01000
SubmissionRegistration date: 21-May-2013
Wellcome Sanger Institute
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)1222
WGS master54
SRA Experiments211
Protein Sequences145960
Publications
PubMed1
PMC1
Other datasets
BioSample210
Assembly54
Assembly details:
Assembly levelNumber of Assemblies
54
54
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_001167985.1ContigCPKB00000000SAMEA1569628
E2125
GCA_001164545.1ContigCPKA00000000SAMEA1569622
E4278
GCA_001151145.1ContigCPJR00000000SAMEA1569580
E4278
GCA_001148525.1ContigCPJU00000000SAMEA1569620
E4278
GCA_001150145.1ContigCPJN00000000SAMEA1569611
E4278
GCA_001150365.1ContigCPJP00000000SAMEA1569637
E4278
GCA_001138445.1ContigCPKD00000000SAMEA1569613
E2125
GCA_001141805.1ContigCPJT00000000SAMEA1569594
E2125
GCA_001143805.1ContigCPJX00000000SAMEA1569600
E2125
GCA_001086885.1ContigCPJW00000000SAMEA1569610
E4278
GCA_001091885.1ContigCPJQ00000000SAMEA1569574
E4278
GCA_001120905.1ContigCPJS00000000SAMEA1569599
E4278
GCA_001120725.1ContigCPJY00000000SAMEA1569592
E4278
GCA_001126325.1ContigCPJM00000000SAMEA1569591
E2125
GCA_001133445.1ContigCPJZ00000000SAMEA1569586
E4278
GCA_001130185.1ContigCPJL00000000SAMEA1569589
E4278
GCA_001113685.1ContigCPJO00000000SAMEA1569604
E4278
GCA_001113025.1ContigCPJV00000000SAMEA1569627
E2125
GCA_001351335.1ContigCVHK00000000SAMEA1569625
UK13136
GCA_001351315.1ContigCVHT00000000SAMEA1569618
UKST63/485
GCA_001351375.1ContigCVGV00000000SAMEA1569630
UK13136
GCA_001351355.1ContigCVGX00000000SAMEA1569626
UKST63/485
GCA_001351295.1ContigCVHH00000000SAMEA1569617
UKST63/485
GCA_001351275.1ContigCVHL00000000SAMEA1569609
UKST63/485
GCA_001351255.1ContigCVHF00000000SAMEA1569608
UK13136
GCA_001351235.1ContigCVHG00000000SAMEA1569607
UKST63/485
GCA_001351215.1ContigCVHV00000000SAMEA1569605
UKST63/485
GCA_001351195.1ContigCFVH00000000SAMEA1569601
E2125 = C0X
GCA_001351175.1ContigCVHO00000000SAMEA1569598
UK13136
GCA_001351155.1ContigCVGY00000000SAMEA1569597
UK13136
GCA_001351135.1ContigCVHE00000000SAMEA1569595
UKST63/485
GCA_001351115.1ContigCVHU00000000SAMEA1569593
UK13136
GCA_001351095.1ContigCVJR00000000SAMEA1569590
E4278 = D0X
GCA_001351075.1ContigCVHN00000000SAMEA1569585
UKST63/485
GCA_001351055.1ContigCFVG00000000SAMEA1569584
E2125
GCA_001351035.1ContigCIEO00000000SAMEA1569581
E2125
GCA_001351015.1ContigCFNL00000000SAMEA1569579
E2125
GCA_001350995.1ContigCVHA00000000SAMEA1569577
UK13136
GCA_001350975.1ContigCVGZ00000000SAMEA1569572
UKST63/485
GCA_001350955.1ContigCVHI00000000SAMEA1569570
UKST63/485
GCA_001350935.1ContigCVHJ00000000SAMEA1569568
UK13136
GCA_001350915.1ContigCVHZ00000000SAMEA1569566
UK13136
GCA_001351615.1ContigCHCQ00000000SAMEA1569649
E4278
GCA_001351595.1ContigCVHW00000000SAMEA1569648
UKST63/485
GCA_001351575.1ContigCVHM00000000SAMEA1569646
UKST63/485
GCA_001351555.1ContigCHJE00000000SAMEA1569645
E2125
GCA_001351535.1ContigCVGU00000000SAMEA1569644
UK13136
GCA_001351515.1ContigCVGW00000000SAMEA1569641
UK13136
GCA_001351495.1ContigCFIK00000000SAMEA1569640
E4278
GCA_001351475.1ContigCHCT00000000SAMEA1569639
E2125
GCA_001351455.1ContigCVHY00000000SAMEA1569636
UKST63/485
GCA_001351435.1ContigCVHX00000000SAMEA1569634
UKST63/485
GCA_001351415.1ContigCVHC00000000SAMEA1569632
UK13136
GCA_001351395.1ContigCVIA00000000SAMEA1569631
UK13136
SRA Data Details
ParameterValue
Data volume, Gbases102
Data volume, Mbytes56472

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