See
Genome Information for Pseudomonas brassicacearum
Sequence the genome of Pseudomonas brassicacearum LBUM300.
| Accession | PRJNA292573 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Organism | Pseudomonas brassicacearum[Taxonomy ID: 930166] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas brassicacearum |
| Publications (total 5) Less... | - Novinscak A et al., "Complete Genome Sequence of Pseudomonas brassicacearum LBUM300, a Disease-Suppressive Bacterium with Antagonistic Activity toward Fungal, Oomycete, and Bacterial Plant Pathogens.", Genome Announc, 2016 Jan 28;4(1)
More...- Novinscak A et al., "Complete Genome Sequence of Pseudomonas brassicacearum LBUM300, a Disease-Suppressive Bacterium with Antagonistic Activity toward Fungal, Oomycete, and Bacterial Plant Pathogens.", Genome Announc, 2016 Jan 28;4(1)
- Lanteigne C et al., "Production of DAPG and HCN by Pseudomonas sp. LBUM300 contributes to the biological control of bacterial canker of tomato.", Phytopathology, 2012 Oct;102(10):967-73
- DeCoste NJ et al., "Relative and absolute quantitative real-time PCR-based quantifications of hcnC and phlD gene transcripts in natural soil spiked with Pseudomonas sp. strain LBUM300.", Appl Environ Microbiol, 2011 Jan;77(1):41-7
- DeCoste NJ et al., "Verticillium dahliae alters Pseudomonas spp. populations and HCN gene expression in the rhizosphere of strawberry.", Can J Microbiol, 2010 Nov;56(11):906-15
- Paulin MM et al., "Transcriptional activity of antifungal metabolite-encoding genes phlD and hcnBC in Pseudomonas spp. using qRT-PCR.", FEMS Microbiol Ecol, 2009 May;68(2):212-22
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| Grants | - "Molecular characterization of bacterial antibiosis in the rhizosphere and its impact on Solanaceous plant diseases" (Grant ID 283254-2001, National Science and Engineering Research Council of Canada)
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| Submission | Registration date: 30-Nov-2015
Universite de Moncton |
| Relevance | Environmental |
| Locus Tag Prefix | AK973 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (Genomic DNA) | 1 |
| SRA Experiments | 1 |
| Protein Sequences | 6120 |
| Publications |
| PubMed | 5 |
| PMC | 2 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |