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Accession: PRJEB37543 ID: 636333

Characterization of Streptococcus salivarius conjugatif elements content and diversity

This study aimed to characterize and compare genomes of Streptococcus salivarius regarding ICE and IME content and related adaptation genes
AccessionPRJEB37543
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 1-Jun-2020
INRAE
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)242
WGS master6
SRA Experiments20
Other datasets
BioSample20
Assembly6
Assembly details:
Assembly levelNumber of Assemblies
6
6
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_903932585.1ScaffoldCAIZGP000000000SAMEA6647163
clinical strain from anonymous patient of Limoges Hospital
GCA_903910465.1ScaffoldCAIVZS000000000SAMEA6647159
clinical strain from anonymous patient of Limoges Hospital
GCA_903910355.1ScaffoldCAIVZI000000000SAMEA6647158
commensal strain from anonymous patient (individual 7)
GCA_903910225.1ScaffoldCAIVYT000000000SAMEA6647157
commensal strain from anonymous patient (individual 4)
GCA_903909965.1ScaffoldCAIVXX000000000SAMEA6647155
commensal strain from anonymous patient (individual 1)
GCA_903908965.1ScaffoldCAIVTS000000000SAMEA6647150
clinical strain from anonymous patient from Besancon hospital
SRA Data Details
ParameterValue
Data volume, Gbases52
Data volume, Mbytes34610

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