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Accession: PRJNA641166 ID: 641166

The distribution of plasmid fitness effects promotes plasmid persistence in bacterial communities

50 enterobacteria strains isolated from the gut microbiota of hospitalized patients
AccessionPRJNA641166
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 22-Jun-2020
Hospital Ramon y Cajal
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)47
SRA Experiments47
Other datasets
BioSample47
Assembly47
Assembly details:
Assembly levelNumber of Assemblies
47
47
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_015644565.1ContigJADOBU000000000SAMN15344961
Ec001
GCA_015644545.1ContigJADOBW000000000SAMN15344963
Ec003
GCA_015644505.1ContigJADOBV000000000SAMN15344962
Ec002
GCA_015644495.1ContigJADOBX000000000SAMN15344964
Ec004
GCA_015644485.1ContigJADOBY000000000SAMN15344965
Ec005
GCA_015644465.1ContigJADOBZ000000000SAMN15344966
Ec006
GCA_015644435.1ContigJADOCC000000000SAMN15344969
Ec010
GCA_015644395.1ContigJADOCD000000000SAMN15344970
Ec011
GCA_015644385.1ContigJADOCA000000000SAMN15344967
Ec007
GCA_015644405.1ContigJADOCB000000000SAMN15344968
Ec008
GCA_015644365.1ContigJADOCF000000000SAMN15344972
Ec013
GCA_015644315.1ContigJADOCG000000000SAMN15344973
Ec014
GCA_015644305.1ContigJADOCI000000000SAMN15344975
Ec016
GCA_015644295.1ContigJADOCE000000000SAMN15344971
Ec012
GCA_015644285.1ContigJADOCH000000000SAMN15344974
Ec015
GCA_015644255.1ContigJADOCL000000000SAMN15344978
Ec020
GCA_015644225.1ContigJADOCJ000000000SAMN15344976
Ec018
GCA_015644215.1ContigJADOCK000000000SAMN15344977
Ec019
GCA_015644195.1ContigJADOCM000000000SAMN15344979
Ec021
GCA_015644185.1ContigJADOCN000000000SAMN15344980
Ec022
GCA_015644155.1ContigJADOCP000000000SAMN15344982
Ec024
GCA_015644135.1ContigJADOCO000000000SAMN15344981
Ec023
GCA_015644125.1ContigJADOCQ000000000SAMN15344983
Ec025
GCA_015644095.1ContigJADOCS000000000SAMN15344985
Kpn02
GCA_015644085.1ContigJADOCR000000000SAMN15344984
Kpn01
GCA_015644045.1ContigJADOCT000000000SAMN15344986
Kpn03
GCA_015644025.1ContigJADOCU000000000SAMN15344987
Kpn04
GCA_015643995.1ContigJADOCW000000000SAMN15344989
Kpn07
GCA_015643985.1ContigJADOCX000000000SAMN15344990
Kpn08
GCA_015643945.1ContigJADOCZ000000000SAMN15344992
Kpn10
GCA_015643895.1ContigJADOCY000000000SAMN15344991
Kpn09
GCA_015643885.1ContigJADODC000000000SAMN15344995
Kpn13
GCA_015643805.1ContigJADODD000000000SAMN15344996
Kpn14
GCA_015643785.1ContigJADODH000000000SAMN15345000
Kpn18
GCA_015643725.1ContigJADODI000000000SAMN15345001
Kpn19
GCA_015643715.1ContigJADODJ000000000SAMN15345002
Kpn20
GCA_015643705.1ContigJADODM000000000SAMN15345005
Kpn23
GCA_015643695.1ContigJADODL000000000SAMN15345004
Kpn22
GCA_015643685.1ContigJADODK000000000SAMN15345003
Kpn21
GCA_015643625.1ContigJADODN000000000SAMN15345006
Kpn24
GCA_015643615.1ContigJADODO000000000SAMN15345007
Kpn25
GCA_015643815.1ContigJADODG000000000SAMN15344999
Kpn17
GCA_015643795.1ContigJADODE000000000SAMN15344997
Kpn15
GCA_015643935.1ContigJADODA000000000SAMN15344993
Kpn11
GCA_015643915.1ContigJADODB000000000SAMN15344994
Kpn12
GCA_015644035.1ContigJADOCV000000000SAMN15344988
Kpn06
GCA_015643835.1ContigJADODF000000000SAMN15344998
Kpn16
SRA Data Details
ParameterValue
Data volume, Gbases51
Data volume, Mbytes18671

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