ID 779451 - BioProject

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Accession: PRJNA779451 ID: 779451

Genome sequences of plant-beneficial Pseudomonas strains with biocontrol activity against lettuce bacterial pathogens

Genome sequences of plant-beneficial Pseudomonas strains isolated from agricultural fields located in the province of Quebec, Canada. These strains display biocontrol activity against various lettuce bacterial pathogens.

Accession	PRJNA779451
Data Type	Raw sequence reads
Scope	Multispecies
Publications	Published online: Zboralski A et al., "Harnessing the genomic diversity of Pseudomonas strains against lettuce bacterial pathogens", Frontiers in Microbiology, 2022;13
Submission	Registration date: 10-Nov-2021 Agriculture and Agri-food Canada
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	36
SRA Experiments	36
Protein Sequences	194588
Other datasets
BioSample	36
Assembly	36

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

36
36

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_024749365.1	1	SAMN23038883	B21-020	Pseudomonas alvandae
GCA_024749105.1	1	SAMN23038783	B21-026	Pseudomonas atacamensis
GCA_024748815.1	1	SAMN23038803	B21-050	Pseudomonas atacamensis
GCA_024748895.1	1	SAMN23038799	B21-045	Pseudomonas atacamensis
GCA_024749265.1	1	SAMN23038775	B21-016	Pseudomonas brassicacearum
GCA_024748655.1	1	SAMN23038796	B21-042	Pseudomonas donghuensis
GCA_024748635.1	1	SAMN23038797	B21-043	Pseudomonas donghuensis
GCA_024749125.1	1	SAMN23038782	B21-025	Pseudomonas laurylsulfatiphila
GCA_024748715.1	1	SAMN23038793	B21-039	Pseudomonas moraviensis
GCA_024749145.1	1	SAMN23038781	B21-024	Pseudomonas protegens
GCA_024749005.1	1	SAMN23038788	B21-030	Pseudomonas protegens
GCA_024749025.1	1	SAMN23038787	B21-029	Pseudomonas putida
GCA_024748755.1	1	SAMN23038800	B21-046	Pseudomonas rhodesiae
GCA_024749065.1	1	SAMN23038785	B21-027	Pseudomonas sichuanensis
GCA_024748535.1	1	SAMN23038805	B21-052	Pseudomonas sichuanensis
GCA_024749085.1	1	SAMN23038784	B21-063	Pseudomonas siliginis
GCA_024749345.1	1	SAMN23038771	B21-009	Pseudomonas sp. B21-009
GCA_024749325.1	1	SAMN23038772	B21-010	Pseudomonas sp. B21-010
GCA_024749305.1	1	SAMN23038773	B21-012	Pseudomonas sp. B21-012
GCA_024749285.1	1	SAMN23038774	B21-015	Pseudomonas sp. B21-015
GCA_024749245.1	1	SAMN23038776	B21-017	Pseudomonas sp. B21-017
GCA_024749225.1	1	SAMN23038777	B21-019	Pseudomonas sp. B21-019
GCA_024749205.1	1	SAMN23038778	B21-021	Pseudomonas sp. B21-021
GCA_024749165.1	1	SAMN23038780	B21-023	Pseudomonas sp. B21-023
GCA_024749045.1	1	SAMN23038786	B21-028	Pseudomonas sp. B21-028
GCA_024748985.1	1	SAMN23038789	B21-031	Pseudomonas sp. B21-031
GCA_024748965.1	1	SAMN23038790	B21-032	Pseudomonas sp. B21-032
GCA_024748945.1	1	SAMN23038791	B21-035	Pseudomonas sp. B21-035
GCA_024748925.1	1	SAMN23038792	B21-036	Pseudomonas sp. B21-036
GCA_024748695.1	1	SAMN23038794	B21-040	Pseudomonas sp. B21-040
GCA_024748675.1	1	SAMN23038795	B21-041	Pseudomonas sp. B21-041
GCA_024748735.1	1	SAMN23038798	B21-044	Pseudomonas sp. B21-044
GCA_024748775.1	1	SAMN23038801	B21-047	Pseudomonas sp. B21-047
GCA_024748615.1	1	SAMN23038802	B21-048	Pseudomonas sp. B21-048
GCA_024748795.1	1	SAMN23038804	B21-051	Pseudomonas sp. B21-051
GCA_024749185.1	1	SAMN23038779	B21-022	Pseudomonas wadenswilerensis

SRA Data Details

Parameter	Value
Data volume, Gbases	53
Data volume, Mbytes	13305

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Genome sequences of plant-beneficial Pseudomonas strains with biocontrol activity against lettuce bacterial pathogens

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