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Accession: PRJNA319191 ID: 319191

Snodgrassella alvi wkB2

Snodgrassella alvi wkB2 Tn-SEQ and RNA-seq raw sequence reads

See Genome Information for Snodgrassella alvi
Read data from Tn-SEQ and RNA-seq of Snodgrassella alvi strain wkB2 from control replicates of plated bacteria and from replicates of pooled ileums of inoculated Apis mellifera workers
AccessionPRJNA319191
Data TypeRaw sequence reads
OrganismSnodgrassella alvi wkB2[Taxonomy ID: 1196094]
Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae; Snodgrassella; Snodgrassella alvi; Snodgrassella alvi wkB2
Grants
  • "Host and symbiont determinants of colonization by a co-evolved gut community" (Grant ID R01 GM108477, NIH National Institute of General Medical Sciences)
SubmissionRegistration date: 21-Apr-2016
University of Texas at Austin
RelevanceTn-SEQ analyzed for essential genome and for insertions in loci with fitness effects. RNA-seq reads compared to Tn-SEQ results.
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Other datasets
BioSample12
SRA Data Details
ParameterValue
Data volume, Gbases8
Data volume, Mbytes4514

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