Enterobacter cloacae complex (ID 1159154) - BioProject

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Accession: PRJNA1159154 ID: 1159154

Enterobacter cloacae complex

Carbapenemase-producing Enterobacter cloacae Complex from Infections in Argentina Genome sequencing and assembly

Characterize the population structure of the carbapenemase-producing Enterobacter cloacae complex, recovered from infections in Argentina (2016-2022), to determine the distribution of species, subspecies, circulating clones and carbapenemases.

Accession	PRJNA1159154
Data Type	Genome sequencing
Scope	Multispecies
Submission	Registration date: 10-Sep-2024 National Institute of Infectious Diseases (INEI) - ANLIS DR. CARLOS G. MALBRAN
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	130
SRA Experiments	131
Other datasets
BioSample	131
Assembly	131

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

131
131

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_041985685.1	JBHGTP000000000	SAMN43584907	M21574	Enterobacter asburiae
GCA_041980185.1	JBHGPS000000000	SAMN43585008	M27656	Enterobacter bugandensis
GCA_041985045.1	JBHGSP000000000	SAMN43584933	M22804	Enterobacter chengduensis
GCA_041982185.1	JBHGSI000000000	SAMN43584940	M23267	Enterobacter chuandaensis
GCA_041981845.1	JBHGRQ000000000	SAMN43584958	M25195	Enterobacter cloacae subsp. cloacae
GCA_041981765.1	JBHGRK000000000	SAMN43584964	M25543	Enterobacter cloacae subsp. cloacae
GCA_041981465.1	JBHGRC000000000	SAMN43584972	M25693	Enterobacter cloacae subsp. cloacae
GCA_041981425.1	JBHGRB000000000	SAMN43584973	M25700	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981395.1	JBHGQX000000000	SAMN43584977	M25853	Enterobacter hormaechei subsp. xiangfangensis
GCA_041981385.1	JBHGRA000000000	SAMN43584974	M25711	Enterobacter hormaechei subsp. oharae
GCA_041981325.1	JBHGQZ000000000	SAMN43584975	M25774	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981305.1	JBHGQY000000000	SAMN43584976	M25799	Enterobacter hormaechei subsp. hoffmannii
GCA_041981245.1	JBHGQV000000000	SAMN43584979	M27016	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981225.1	JBHGQW000000000	SAMN43584978	M25854	Enterobacter hormaechei subsp. xiangfangensis
GCA_041981165.1	JBHGQU000000000	SAMN43584980	M27045	Enterobacter hormaechei subsp. hoffmannii
GCA_041981145.1	JBHGQS000000000	SAMN43584982	M27090	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981125.1	JBHGQT000000000	SAMN43584981	M27064	Enterobacter hormaechei subsp. hoffmannii
GCA_041981065.1	JBHGQQ000000000	SAMN43584984	M27184	Enterobacter hormaechei subsp. xiangfangensis
GCA_041981045.1	JBHGQR000000000	SAMN43584983	M27159	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980985.1	JBHGQO000000000	SAMN43584986	M27248	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980975.1	JBHGQN000000000	SAMN43584987	M27250	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980965.1	JBHGQP000000000	SAMN43584985	M27234	Enterobacter hormaechei subsp. oharae
GCA_041980925.1	JBHGQM000000000	SAMN43584988	M27251	Enterobacter hormaechei subsp. xiangfangensis
GCA_041980845.1	JBHGQL000000000	SAMN43584989	M27267	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980805.1	JBHGQK000000000	SAMN43584990	M27291	Enterobacter hormaechei subsp. xiangfangensis
GCA_041980785.1	JBHGQJ000000000	SAMN43584991	M27330	Enterobacter hormaechei subsp. xiangfangensis
GCA_041980765.1	JBHGQI000000000	SAMN43584992	M27355	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981745.1	JBHGRL000000000	SAMN43584963	M25536	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981725.1	JBHGRH000000000	SAMN43584967	M25566	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981705.1	JBHGRJ000000000	SAMN43584965	M25552	Enterobacter hormaechei subsp. hoffmannii
GCA_041981685.1	JBHGRI000000000	SAMN43584966	M25563	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981605.1	JBHGRE000000000	SAMN43584970	M25647	Enterobacter hormaechei subsp. xiangfangensis
GCA_041981625.1	JBHGRF000000000	SAMN43584969	M25646	Enterobacter hormaechei subsp. xiangfangensis
GCA_041981565.1	JBHGRG000000000	SAMN43584968	M25570	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981495.1	JBHGRD000000000	SAMN43584971	M25684	Enterobacter hormaechei subsp. hormaechei
GCA_041981825.1	JBHGRP000000000	SAMN43584959	M25230	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981805.1	JBHGRN000000000	SAMN43584961	M25243	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981785.1	JBHGRM000000000	SAMN43584962	M25408	Enterobacter hormaechei subsp. steigerwaltii
GCA_041982005.1	JBHGRY000000000	SAMN43584950	M23812	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981965.1	JBHGRV000000000	SAMN43584953	M23930	Enterobacter hormaechei subsp. hoffmannii
GCA_041981985.1	JBHGRW000000000	SAMN43584952	M23913	Enterobacter hormaechei subsp. oharae
GCA_041981945.1	JBHGRU000000000	SAMN43584954	M23941	Enterobacter hormaechei subsp. steigerwaltii
GCA_041982265.1	JBHGSK000000000	SAMN43584938	M23237	Enterobacter hormaechei subsp. xiangfangensis
GCA_041982245.1	JBHGSH000000000	SAMN43584941	M23322	Enterobacter hormaechei subsp. steigerwaltii
GCA_041982225.1	JBHGSJ000000000	SAMN43584939	M23260	Enterobacter hormaechei subsp. hoffmannii
GCA_041982205.1	JBHGSG000000000	SAMN43584942	M23389	Enterobacter hormaechei subsp. steigerwaltii
GCA_041982165.1	JBHGSF000000000	SAMN43584943	M23431	Enterobacter hormaechei subsp. xiangfangensis
GCA_041982145.1	JBHGSE000000000	SAMN43584944	M23433	Enterobacter hormaechei subsp. steigerwaltii
GCA_041982105.1	JBHGSC000000000	SAMN43584946	M23694	Enterobacter hormaechei subsp. steigerwaltii
GCA_041982125.1	JBHGSD000000000	SAMN43584945	M23468	Enterobacter hormaechei subsp. hoffmannii
GCA_041982085.1	JBHGSB000000000	SAMN43584947	M23742	Enterobacter hormaechei subsp. steigerwaltii
GCA_041982065.1	JBHGSA000000000	SAMN43584948	M23766	Enterobacter hormaechei subsp. steigerwaltii
GCA_041982045.1	JBHGRZ000000000	SAMN43584949	M23797	Enterobacter hormaechei subsp. xiangfangensis
GCA_041980265.1	JBHGPU000000000	SAMN43585006	M27600	Enterobacter hormaechei subsp. oharae
GCA_041980245.1	JBHGPT000000000	SAMN43585007	M27654	Enterobacter hormaechei subsp. hoffmannii
GCA_041981865.1	JBHGRO000000000	SAMN43584960	M25238	Enterobacter hormaechei subsp. hoffmannii
GCA_041980205.1	JBHGPR000000000	SAMN43585009	M27681	Enterobacter hormaechei subsp. xiangfangensis
GCA_041980165.1	JBHGPQ000000000	SAMN43585010	M27697	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980045.1	JBHGPO000000000	SAMN43585012	M27793	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980725.1	JBHGQH000000000	SAMN43584993	M27356	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980675.1	JBHGQG000000000	SAMN43584994	M27364	Enterobacter hormaechei subsp. oharae
GCA_041980665.1	JBHGQF000000000	SAMN43584995	M27400	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980625.1	JBHGQE000000000	SAMN43584996	M27411	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980585.1	JBHGQD000000000	SAMN43584997	M27439	Enterobacter hormaechei subsp. hormaechei
GCA_041980565.1	JBHGQB000000000	SAMN43584999	M27457	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980545.1	JBHGQC000000000	SAMN43584998	M27442	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980525.1	JBHGQA000000000	SAMN43585000	M27519	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980485.1	JBHGPZ000000000	SAMN43585001	M27525	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981905.1	JBHGRT000000000	SAMN43584955	M25004	Enterobacter hormaechei subsp. steigerwaltii
GCA_041980385.1	JBHGPY000000000	SAMN43585002	M27527	Enterobacter hormaechei subsp. xiangfangensis
GCA_041980365.1	JBHGPW000000000	SAMN43585004	M27535	Enterobacter hormaechei subsp. xiangfangensis
GCA_041980345.1	JBHGPX000000000	SAMN43585003	M27528	Enterobacter hormaechei subsp. xiangfangensis
GCA_041980325.1	JBHGPV000000000	SAMN43585005	M27542	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985025.1	JBHGSL000000000	SAMN43584937	M23188	Enterobacter hormaechei subsp. xiangfangensis
GCA_041985005.1	JBHGSN000000000	SAMN43584935	M22887	Enterobacter hormaechei subsp. steigerwaltii
GCA_041984985.1	JBHGSO000000000	SAMN43584934	M22884	Enterobacter hormaechei subsp. steigerwaltii
GCA_041984965.1	JBHGSM000000000	SAMN43584936	M23024	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985465.1	JBHGTH000000000	SAMN43584915	M21900	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985725.1	JBHGTM000000000	SAMN43584910	M21662	Enterobacter hormaechei subsp. xiangfangensis
GCA_041985665.1	JBHGTN000000000	SAMN43584909	M21637	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985605.1	JBHGTI000000000	SAMN43584914	M21893	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985885.1	JBHGTR000000000	SAMN43584905	M21461	Enterobacter hormaechei subsp. xiangfangensis
GCA_041985865.1	JBHGTS000000000	SAMN43584904	M21426	Enterobacter hormaechei subsp. hoffmannii
GCA_041985845.1	JBHGTT000000000	SAMN43584903	M21402	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985805.1	JBHGTQ000000000	SAMN43584906	M21491	Enterobacter hormaechei subsp. xiangfangensis
GCA_041985765.1	JBHGTO000000000	SAMN43584908	M21584	Enterobacter hormaechei subsp. hoffmannii
GCA_041985565.1	JBHGTJ000000000	SAMN43584913	M21766	Enterobacter hormaechei subsp. hoffmannii
GCA_041985545.1	JBHGTK000000000	SAMN43584912	M21748	Enterobacter hormaechei subsp. hoffmannii
GCA_041985525.1	JBHGTL000000000	SAMN43584911	M21683	Enterobacter hormaechei subsp. xiangfangensis
GCA_041985405.1	JBHGTE000000000	SAMN43584918	M22047	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985385.1	JBHGTG000000000	SAMN43584916	M22005	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985365.1	JBHGTF000000000	SAMN43584917	M22013	Enterobacter hormaechei subsp. oharae
GCA_041985325.1	JBHGTC000000000	SAMN43584920	M22105	Enterobacter hormaechei subsp. xiangfangensis
GCA_041985305.1	JBHGTD000000000	SAMN43584919	M22067	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985285.1	JBHGTB000000000	SAMN43584921	M22192	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985265.1	JBHGTA000000000	SAMN43584922	M22250	Enterobacter hormaechei subsp. xiangfangensis
GCA_041985245.1	JBHGSX000000000	SAMN43584925	M22360	Enterobacter hormaechei subsp. oharae
GCA_041985225.1	JBHGSZ000000000	SAMN43584923	M22254	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985205.1	JBHGSY000000000	SAMN43584924	M22317	Enterobacter hormaechei subsp. oharae
GCA_041985185.1	JBHGSV000000000	SAMN43584927	M22495	Enterobacter hormaechei subsp. hoffmannii
GCA_041985165.1	JBHGSW000000000	SAMN43584926	M22387	Enterobacter hormaechei subsp. hoffmannii
GCA_041985145.1	JBHGSU000000000	SAMN43584928	M22549	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985125.1	JBHGST000000000	SAMN43584929	M22581	Enterobacter hormaechei subsp. xiangfangensis
GCA_041985105.1	JBHGSS000000000	SAMN43584930	M22601	Enterobacter hormaechei subsp. xiangfangensis
GCA_041985085.1	JBHGSQ000000000	SAMN43584932	M22790	Enterobacter hormaechei subsp. xiangfangensis
GCA_041985065.1	JBHGSR000000000	SAMN43584931	M22784	Enterobacter hormaechei subsp. steigerwaltii
GCA_041986745.1	JBHGUO000000000	SAMN43584882	M19842	Enterobacter hormaechei subsp. steigerwaltii
GCA_041986625.1	JBHGUN000000000	SAMN43584883	M19846	Enterobacter hormaechei subsp. hoffmannii
GCA_041986585.1	JBHGUL000000000	SAMN43584885	M19970	Enterobacter hormaechei subsp. oharae
GCA_041986605.1	JBHGUM000000000	SAMN43584884	M19930	Enterobacter hormaechei subsp. steigerwaltii
GCA_041986545.1	JBHGUK000000000	SAMN43584886	M19971	Enterobacter hormaechei subsp. steigerwaltii
GCA_041986495.1	JBHGUJ000000000	SAMN43584887	M21000	Enterobacter hormaechei subsp. xiangfangensis
GCA_041986425.1	JBHGUF000000000	SAMN43584891	M21076	Enterobacter hormaechei subsp. hoffmannii
GCA_041986405.1	JBHGUH000000000	SAMN43584889	M21030	Enterobacter hormaechei subsp. xiangfangensis
GCA_041986365.1	JBHGUG000000000	SAMN43584890	M21059	Enterobacter hormaechei subsp. oharae
GCA_041986285.1	JBHGUD000000000	SAMN43584893	M21122	Enterobacter hormaechei subsp. steigerwaltii
GCA_041986265.1	JBHGUE000000000	SAMN43584892	M21115	Enterobacter hormaechei subsp. steigerwaltii
GCA_041986225.1	JBHGUC000000000	SAMN43584894	M21181	Enterobacter hormaechei subsp. oharae
GCA_041986205.1	JBHGUA000000000	SAMN43584896	M21206	Enterobacter hormaechei subsp. steigerwaltii
GCA_041986185.1	JBHGUB000000000	SAMN43584895	M21183	Enterobacter hormaechei subsp. steigerwaltii
GCA_041986125.1	JBHGTZ000000000	SAMN43584897	M21208	Enterobacter hormaechei subsp. steigerwaltii
GCA_041986085.1	JBHGTX000000000	SAMN43584899	M21259	Enterobacter hormaechei subsp. oharae
GCA_041986065.1	JBHGTY000000000	SAMN43584898	M21251	Enterobacter hormaechei subsp. xiangfangensis
GCA_041986015.1	JBHGTW000000000	SAMN43584900	M21276	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985995.1	JBHGTV000000000	SAMN43584901	M21287	Enterobacter hormaechei subsp. steigerwaltii
GCA_041985945.1	JBHGTU000000000	SAMN43584902	M21397	Enterobacter hormaechei subsp. xiangfangensis
GCA_041979985.1	JBHGPP000000000	SAMN43585011	M27730	Enterobacter hormaechei subsp. steigerwaltii
GCA_041981885.1	JBHGRS000000000	SAMN43584956	M25141	Enterobacter kobei
GCA_041982025.1	JBHGRX000000000	SAMN43584951	M23908	Enterobacter kobei
GCA_041981925.1	JBHGRR000000000	SAMN43584957	M25166	Enterobacter kobei
GCA_041986435.1	JBHGUI000000000	SAMN43584888	M21018	Enterobacter mori

SRA Data Details

Parameter	Value
Data volume, Gbases	284
Data volume, Mbytes	94607

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Enterobacter cloacae complex

Carbapenemase-producing Enterobacter cloacae Complex from Infections in Argentina Genome sequencing and assembly

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