This dataset is being generated to investigate the genomic epidemiology and AMR in Escherichia/Shigella sp in Victoria, Australia
| Accession | PRJNA857526 |
| Data Type | Raw sequence reads |
| Scope | Multispecies |
| Publications (total 4) Less... | - Sherry NL et al., "An ISO-certified genomics workflow for identification and surveillance of antimicrobial resistance.", Nat Commun, 2023 Jan 4;14(1):60
More...- Sherry NL et al., "An ISO-certified genomics workflow for identification and surveillance of antimicrobial resistance.", Nat Commun, 2023 Jan 4;14(1):60
- Sherry NL et al., "Multi-site implementation of whole genome sequencing for hospital infection control: A prospective genomic epidemiological analysis.", Lancet Reg Health West Pac, 2022 Jun;23:100446
- Lane CR et al., "Search and Contain: Impact of an Integrated Genomic and Epidemiological Surveillance and Response Program for Control of Carbapenemase-producing Enterobacterales.", Clin Infect Dis, 2021 Dec 6;73(11):e3912-e3920
- Ingle DJ et al., "Prolonged Outbreak of Multidrug-Resistant Shigella sonnei Harboring bla(CTX-M-27) in Victoria, Australia.", Antimicrob Agents Chemother, 2020 Nov 17;64(12)
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| Grants | - "Australian Pathogen Genomics (AusPathoGen) Program" (Grant ID FSPGN000049, Medical Research Future Fund - Genomics Health Futures Mission (GHFM) Flagships - Pathogen Genomics)
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| Submission | Registration date: 11-Jul-2022
Microbiological Diagnostic Unit Public Health Laboratory |
| Related Resources | |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 3661 |
| Publications |
| PubMed | 4 |
| PMC | 4 |
| Other datasets |
| BioSample | 3662 |