Yersinia enterocolitica Genus project (ID 203890) - BioProject

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Accession: PRJEB2117 ID: 203890

Yersinia enterocolitica Genus project

For further information on this study please see http://www.sanger.ac.uk/resources/downloads/bacteria/yersinia. More...

Accession	PRJEB2117
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Publications	Reuter S et al., "Parallel independent evolution of pathogenicity within the genus Yersinia.", Proc Natl Acad Sci U S A, 2014 May 6;111(18):6768-73 Savin C et al., "The Yersinia pseudotuberculosis complex: characterization and delineation of a new species, Yersinia wautersii.", Int J Med Microbiol, 2014 May;304(3-4):452-63
Submission	Registration date: 21-May-2013 Wellcome Sanger Institute

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	6968
WGS master	97
SRA Experiments	137
Protein Sequences	406208
Publications
PubMed	2
PMC	1
Other datasets
BioSample	127
Assembly	97

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

87
10
97

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_001319845.1	CGBL00000000	SAMEA859928	404/81	Yersinia aleksiciae
GCA_001115185.1	CQEM00000000	SAMEA859891	IP27925	Yersinia aleksiciae
GCA_001319545.1	CHYZ00000000	SAMEA859867	3016/84	Yersinia bercovieri
GCA_001319955.1	CGBH00000000	SAMEA859958	FE80217	Yersinia bercovieri
GCA_001131685.1	CQBU00000000	SAMEA859906	127/84	Yersinia bercovieri
GCA_001136265.1	CPWH00000000	SAMEA859973	2/C/53NMD7	Yersinia enterocolitica
GCA_001097785.1	CPWQ00000000	SAMEA859857	1127	Yersinia enterocolitica
GCA_001319585.1	CGCC00000000	SAMEA859873	38/83	Yersinia frederiksenii
GCA_001319565.1	CGCB00000000	SAMEA859872	3400/83	Yersinia frederiksenii
GCA_001319525.1	CGBN00000000	SAMEA859853	IP23047	Yersinia frederiksenii
GCA_001319985.1	CGCI00000000	SAMEA859967	FCF467	Yersinia frederiksenii
GCA_001098625.1	CPWN00000000	SAMEA859959	FE80258	Yersinia frederiksenii
GCA_001089645.1	CQEC00000000	SAMEA859870	498/85	Yersinia frederiksenii
GCA_001090165.1	CQBO00000000	SAMEA859886	22714/85	Yersinia frederiksenii
GCA_001222845.1	CTKH00000000	SAMEA859956	112/02	Yersinia frederiksenii
GCA_001218185.1	CTJA00000000	SAMEA859860	120/02	Yersinia frederiksenii
GCA_001171065.1	CQDT00000000	SAMEA859974	RS-42	Yersinia frederiksenii
GCA_001158365.1	CPVN00000000	SAMEA859965	FE80151	Yersinia frederiksenii
GCA_001157485.1	CQEP00000000	SAMEA859869	28/85	Yersinia frederiksenii
GCA_001155565.1	CQDU00000000	SAMEA859970	3430	Yersinia frederiksenii
GCA_001151185.1	CPZP00000000	SAMEA859881	IP23698	Yersinia frederiksenii
GCA_001147045.1	CQBW00000000	SAMEA859937	FCF224	Yersinia frederiksenii
GCA_001147425.1	CQBR00000000	SAMEA859962	FCF343	Yersinia frederiksenii
GCA_001135485.1	CQEN00000000	SAMEA859901	FE80988	Yersinia frederiksenii
GCA_001142745.1	CPYY00000000	SAMEA859868	3317/84	Yersinia frederiksenii
GCA_001105765.1	CQBX00000000	SAMEA859945	FCF208	Yersinia frederiksenii
GCA_001121225.1	CQBF00000000	SAMEA859876	IP25924	Yersinia frederiksenii
GCA_001319925.1	CVJX00000000	SAMEA859943	FCF130	Yersinia intermedia
GCA_001319645.1	CHZI00000000	SAMEA859883	IP10066	Yersinia intermedia
GCA_001104645.1	CQCT00000000	SAMEA859961	FCF335	Yersinia intermedia
GCA_001116865.1	CQER00000000	SAMEA859972	58735	Yersinia intermedia
GCA_001140765.1	CPVD00000000	SAMEA859968	FCF84	Yersinia intermedia
GCA_001150525.1	CQBG00000000	SAMEA859851	BR166/97	Yersinia intermedia
GCA_001153385.1	CQBP00000000	SAMEA859946	FCF202	Yersinia intermedia
GCA_001157385.1	CPWY00000000	SAMEA859947	9/85	Yersinia intermedia
GCA_001167085.1	CPVI00000000	SAMEA859880	IP10209	Yersinia intermedia
GCA_001166625.1	CQBB00000000	SAMEA859871	821/84	Yersinia intermedia
GCA_001218045.1	CTFU00000000	SAMEA859882	182/02	Yersinia intermedia
GCA_001222425.1	CTFA00000000	SAMEA859859	141/02	Yersinia intermedia
GCA_001221165.1	CTKY00000000	SAMEA859863	93/02	Yersinia intermedia
GCA_001244565.1	CWJI00000000	SAMEA859919	R148	Yersinia intermedia
GCA_001244675.1	CWJO00000000	SAMEA859966	FE80200	Yersinia intermedia
GCA_001088505.1	CPZJ00000000	SAMEA859852	BR165/97	Yersinia intermedia
GCA_001319625.1	CGCG00000000	SAMEA859878	IP24139	Yersinia kristensenii
GCA_001091065.1	CQAG00000000	SAMEA859938	FCF221	Yersinia kristensenii
GCA_001085865.1	CQDL00000000	SAMEA859963	FCF324	Yersinia kristensenii
GCA_001244605.1	CWJK00000000	SAMEA859918	OK6311	Yersinia kristensenii
GCA_001158505.1	CQAQ00000000	SAMEA859900	FE80982	Yersinia kristensenii
GCA_001153365.1	CPXZ00000000	SAMEA859905	119/84	Yersinia kristensenii
GCA_001144805.1	CQEO00000000	SAMEA859932	FCF580	Yersinia kristensenii
GCA_001134585.1	CPYI00000000	SAMEA859960	FCF326	Yersinia kristensenii
GCA_001142305.1	CQBH00000000	SAMEA859927	24070	Yersinia massiliensis
GCA_001319605.1	CIFJ00000000	SAMEA859874	92/84	Yersinia mollaretii
GCA_001149645.1	CQDS00000000	SAMEA859879	IP25089	Yersinia mollaretii
GCA_001108385.1	CPYJ00000000	SAMEA859854	IP22404	Yersinia mollaretii
GCA_001127065.1	CQBM00000000	SAMEA859902	FE82747	Yersinia mollaretii
GCA_001220765.1	CTIO00000000	SAMEA859865	107/02	Yersinia mollaretii
GCA_001220845.1	CTRC00000000	SAMEA859952	64/02	Yersinia mollaretii
GCA_001222925.1	CTEP00000000	SAMEA859849	58/02	Yersinia mollaretii
GCA_001218645.1	CTKJ00000000	SAMEA859850	61/02	Yersinia mollaretii
GCA_001152565.1	CQAZ00000000	SAMEA859875	A125KOH2	Yersinia pekkanenii
GCA_001319725.1	CIFL00000000	SAMEA859910	PT682	Yersinia pseudotuberculosis
GCA_001319705.1	CIKF00000000	SAMEA859899	IP32881	Yersinia pseudotuberculosis
GCA_001319685.1	CIFM00000000	SAMEA859897	IP32921	Yersinia pseudotuberculosis
GCA_001319665.1	CGGB00000000	SAMEA859895	IP32938	Yersinia pseudotuberculosis
GCA_001319785.1	CHDQ00000000	SAMEA859921	IP33250	Yersinia pseudotuberculosis
GCA_001319765.1	CGBX00000000	SAMEA859920	260	Yersinia pseudotuberculosis
GCA_001319885.1	CGGM00000000	SAMEA859934	OK6088	Yersinia pseudotuberculosis
GCA_001166025.1	CQEB00000000	SAMEA859909	OK5586	Yersinia pseudotuberculosis
GCA_001172325.1	CPXB00000000	SAMEA859890	IP32463	Yersinia pseudotuberculosis
GCA_001150985.1	CQDR00000000	SAMEA859917	2888	Yersinia pseudotuberculosis
GCA_001155645.1	CPVC00000000	SAMEA859944	Y722	Yersinia pseudotuberculosis
GCA_001157205.1	CQEA00000000	SAMEA859903	IP33054	Yersinia pseudotuberculosis
GCA_001144105.1	CQDI00000000	SAMEA859911	N912	Yersinia pseudotuberculosis
GCA_001136125.1	CQBA00000000	SAMEA859926	IP33177	Yersinia pseudotuberculosis
GCA_001110725.1	CPUY00000000	SAMEA859889	IP32544	Yersinia pseudotuberculosis
GCA_001108005.1	CQBJ00000000	SAMEA859924	1231	Yersinia pseudotuberculosis
GCA_001104045.1	CPWK00000000	SAMEA859877	IH111554	Yersinia pseudotuberculosis
GCA_001125265.1	CPXN00000000	SAMEA859893	IP33038	Yersinia pseudotuberculosis
GCA_001124425.1	CQEU00000000	SAMEA859912	No5	Yersinia pseudotuberculosis
GCA_001123345.1	CPWG00000000	SAMEA859940	Y428	Yersinia pseudotuberculosis
GCA_001244655.1	CWJJ00000000	SAMEA859939	Y716	Yersinia pseudotuberculosis
GCA_001244855.1	CWJN00000000	SAMEA859931	SP93422	Yersinia pseudotuberculosis
GCA_001220805.1	CTIQ00000000	SAMEA859888	IP32670	Yersinia pseudotuberculosis
GCA_001320025.1	CIFE00000000	SAMEA859969	3343	Yersinia rohdei
GCA_001223385.1	CTKU00000000	SAMEA859848	56/02	Yersinia rohdei
GCA_001217805.1	CTKE00000000	SAMEA859954	68/02	Yersinia rohdei
GCA_001152185.1	CQCB00000000	SAMEA859904	82589	Yersinia rohdei
GCA_001172905.1	CPUZ00000000	SAMEA859856	OMBL4	Yersinia ruckeri
GCA_001166725.1	CQBN00000000	SAMEA859855	RS41	Yersinia ruckeri
GCA_001319745.1	CHJS00000000	SAMEA859915	Y252	Yersinia similis
GCA_001053095.1	CGBP00000000	SAMEA859916	Y228	Yersinia similis
GCA_001136465.1	CPYL00000000	SAMEA859914	MW109-2	Yersinia similis
GCA_001140625.1	CPZI00000000	SAMEA859929	R819	Yersinia similis
GCA_001114105.1	CQBK00000000	SAMEA859913	Y233	Yersinia similis
GCA_001123825.1	CQAW00000000	SAMEA859923	IP6945	Yersinia thracica
GCA_001319825.1	CVMG00000000	SAMEA859925	WP-931201	Yersinia wautersii

SRA Data Details

Parameter	Value
Data volume, Gbases	49
Data volume, Mbytes	29297

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