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Select item 11379851.

Elevated DNA Damage without signs of aging in the short-sleeping Mexican Cavefish

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Florida State University

Accession:: PRJNA1137985
ID:: 1137985

Select item 11374252.

Effects of aging on gene expression in multiple tissues in surface and cave Astyanax mexicanus

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Florida State University

Accession:: PRJNA1137425
ID:: 1137425

Select item 11330033.

Effects of UV-B radiation on whole-body gene expression of surface and cave Astyanax mexicanus

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Florida State University

Accession:: PRJNA1133003
ID:: 1133003

Select item 10239594.

Starvation resistant cavefish reveal conserved mechanisms of starvation-induced hepatic lipotoxicity

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Regeneration and Stress Biology, IRIBHM, ULB

Accession:: PRJNA1023959
ID:: 1023959

Select item 9805475.

Transcriptomic profile of 3D spheroids developed from Astyanax Liver-derived cells - SFL and CFL.

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Stowers Institute for Medical Research

Accession:: PRJNA980547
ID:: 980547

Select item 9389236.

Astyanax mexicanus

Astyanax mexicanus Eye Transcriptome

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Laboratory of Ecological and Evolutionary Genetics

Accession:: PRJNA938923
ID:: 938923

Select item 9269827.

Cavefish Mount a Rapid and Sustained Regenerative Response Following Skeletal Muscle Injury

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Stowers Institute for Medical Research

Accession:: PRJNA926982
ID:: 926982

Select item 8533668.

Astyanax mexicanus isolate:ESR-SI-001

Astyanax mexicanus isolate:ESR-SI-001 RefSeq Genome sequencing

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: RefSeq Genome sequencing

Scope:: Monoisolate

NCBI

Accession:: PRJNA853366
ID:: 853366

Select item 8193999.

Astyanax mexicanus isolate:ESR-SI-002

Astyanax mexicanus isolate:ESR-SI-002 Genome sequencing and assembly

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

University of Missouri

Accession:: PRJNA819399
ID:: 819399

Select item 81939410.

Astyanax mexicanus isolate:ESR-SI-003

Astyanax mexicanus isolate:ESR-SI-003 Genome sequencing and assembly

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

University of Missouri

Accession:: PRJNA819394
ID:: 819394

Select item 80526711.

Metabolic reprogramming underlies cavefish muscular endurance despite selective loss of muscle mass and contractility

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Stowers Institute for Medical Research

Accession:: PRJNA805267
ID:: 805267

Select item 80271712.

Liver-derived cell lines from cavefish Astyanax mexicanus as an in vitro model for studying metabolic adaptation

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Stowers Institute for Medical Research

Accession:: PRJNA802717
ID:: 802717

Select item 79903813.

Discordant genome assemblies drastically alter the interpretation of single cell RNA sequencing data which can be mitigated by a novel integration method

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Monoisolate

Department of Physiology, Anatomy and Genetics, University of Oxford

Accession:: PRJNA799038
ID:: 799038

Select item 73445514.

Astyanax mexicanus

Pachon cavefish Astyanax mexicanus genome sequencing and assembly

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

GenoFish

Accession:: PRJNA734455
ID:: 734455

Select item 72583215.

Enhanced lipogenesis through Pparγ helps cavefish adapt to food scarcity

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Other

Scope:: Multiisolate

Computational Biology, Stowers Institute for Medical Research

Accession:: PRJNA725832
ID:: 725832

Select item 64151516.

RNA-Seq Analysis of liver cells of Astyanax mexicanus.

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Seidel, Genomics, Stowers Institute

Accession:: PRJNA641515
ID:: 641515

Select item 64151417.

Genome-wide maps of chromatin state in liver cells of Astyanax mexicanus [ChIP-seq]

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Epigenomics

Scope:: Multiisolate

Seidel, Genomics, Stowers Institute

Accession:: PRJNA641514
ID:: 641514

Select item 64151318.

Genome-wide maps of open chromatin in liver cells of Astyanax mexicanus [ATAC-seq]

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Epigenomics

Scope:: Multiisolate

Seidel, Genomics, Stowers Institute

Accession:: PRJNA641513
ID:: 641513

Select item 60680819.

Astyanax mexicanus

Integrative genomic analysis reveals the gene contents, repeats landscapes and evolutionary dynamics of the B chromosomes in multiple species

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

UNESP

Accession:: PRJNA606808
ID:: 606808

Select item 57997520.

Comparative transcriptome analysis of wild and lab populations of Astyanax mexicanus uncovers differential effects of environment and morphotype on gene expression

Organism:: Astyanax mexicanus

Taxonomy:: Astyanax mexicanus (Mexican tetra)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Stowers Institute for Medical Research

Accession:: PRJNA579975
ID:: 579975

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