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Organizing biological data

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Select item 11604801.

Shuttle vector pSP189

Action-at-a-distance mutations analyzed by the advanced supF mutagenesis assay

Taxonomy:: Shuttle vector pSP189

: Project data type: Targeted Locus (Loci)

Scope:: Synthetic

Department of Nucleic Acids Biochemistry Pharmaceutical sciences Graduate School of Biomedical and Health Sciences, Hiroshima University

Accession:: PRJDB18805
ID:: 1160480

Select item 11502032.

Reconstitution of SPO11-dependent double-strand break formation

: Project data type: Other

Scope:: Multispecies

Memorial Sloan Kettering Cancer Center

Accession:: PRJNA1150203
ID:: 1150203

Select item 11385383.

Hop E-probes

: Project data type: Raw sequence reads

Scope:: Multispecies

Julius Kuehn Institute

Accession:: PRJNA1138538
ID:: 1138538

Select item 11098614.

Highly sensitive mapping of type II topoisomerase DNA cleavage sites with SHAN-seq

Taxonomy:: Cloning vector pBR322

: Project data type: Other

Scope:: Multiisolate

National Heart Lung and Blood Institute

Accession:: PRJNA1109861
ID:: 1109861

Select item 11020965.

Synthetic plasmid

Synthetic plasmid Raw sequence reads

Taxonomy:: Synthetic plasmid

: Project data type: Raw sequence reads

Scope:: Monoisolate

Hangzhou normal university

Accession:: PRJNA1102096
ID:: 1102096

Select item 10737586.

Shuttle vector pSP189

ROS-induced mutations analyzed by the advanced supF mutagenesis assay

Taxonomy:: Shuttle vector pSP189

: Project data type: Targeted Locus (Loci)

Scope:: Synthetic

Department of Nucleic Acids Biochemistry Pharmaceutical sciences Graduate School of Biomedical and Health Sciences, Hiroshima University

Accession:: PRJDB17510
ID:: 1073758

Select item 10289267.

Shotgun metagenomic data from SeqOccIn project

Shotgun metagenomic data from mock communities and pig faeces samples

: Project data type: Other

Scope:: Monoisolate

INRAE - GeT-PlaGe

Accession:: PRJEB60080
ID:: 1028926

Select item 10289258.

Targeted metagenomic data from SeqOccIn project

Targeted metagenomic data from mock communities and pig faeces samples

: Project data type: Other

Scope:: Monoisolate

INRAE - GeT-PlaGe

Accession:: PRJEB60079
ID:: 1028925

Select item 9850449.

Long-read sequencing fragmentation study on pBR322 plasmid DNA

: Project data type: Raw sequence reads

Scope:: Multispecies

LP2i Bordeaux

Accession:: PRJNA985044
ID:: 985044

Select item 93812810.

Direct enzymatic sequencing of 5-methylcytosine at single-base resolution [4]

: Project data type: Epigenomics

Scope:: Multispecies

Rahul M. Kohli, Department of Medicine, University of Pennsylvania

Accession:: PRJNA938128
ID:: 938128

Select item 93812711.

Direct enzymatic sequencing of 5-methylcytosine at single-base resolution [3]

: Project data type: Epigenomics

Scope:: Multispecies

Rahul M. Kohli, Department of Medicine, University of Pennsylvania

Accession:: PRJNA938127
ID:: 938127

Select item 93449212.

Combined CRISPR and proteomics screening reveal a cohesin-CTCF-bound allele contributing to increased expression of RUVBL1 and prostate cancer progression [gRNA]

: Project data type: Other

Scope:: Multispecies

Moffitt Cancer Center

Accession:: PRJNA934492
ID:: 934492

Select item 93268913.

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Purification of SARS-CoV-2 RBD in Affinity Chromatography Using a Novel Nanobody Ligand

: Project data type: Other

Scope:: Monoisolate

xinlei li

Accession:: PRJEB59581
ID:: 932689

Select item 89444814.

Mapping and dissecting essential regulatory elements using multi-resolution CRISPR screens

: Project data type: Transcriptome or Gene expression

Scope:: Multispecies

Stanford University Bassik Lab

Accession:: PRJNA894448
ID:: 894448

Select item 85650615.

Shuttle vector pSP189

Advanced SupF mutagenesis assay

Taxonomy:: Shuttle vector pSP189

: Project data type: Targeted Locus (Loci)

Scope:: Synthetic

Hiroshima University

Accession:: PRJDB13753
ID:: 856506

Select item 85579816.

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HIV-1 Vpu sequencing of PBMC and plasma samples from untreated HIV-1 positive individuals

: Project data type: Other

Scope:: Monoisolate

leibniz institute of virology

Accession:: PRJEB53333
ID:: 855798

Select item 83547917.

Customized Dual-gRNA Library for Combinatorial CRISPR Screen

: Project data type: Raw sequence reads

Scope:: Multispecies

Ohio State University

Accession:: PRJNA835479
ID:: 835479

Select item 79874418.

CRISPR activation screen to identify X-chromosomal Xist activators in male embryonic stem cells

: Project data type: Other

Scope:: Multispecies

Schulz Lab, Otto-Warburg-Laboratory, Max Planck Institute for Molecular Genetics

Accession:: PRJNA798744
ID:: 798744

Select item 77769319.

Individual Human Cortical Progenitors Can Produce Excitatory and Inhibitory Neurons

Taxonomy:: Synthetic plasmid

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

UCSF

Accession:: PRJNA777693
ID:: 777693

Select item 73605220.

Development of a user-friendly pipeline for mutational anal-yses of HIV using ultra-accurate maximum-depth sequencing

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Minnesota

Accession:: PRJNA736052
ID:: 736052

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