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Organizing biological data
Aliivibrio salmonicida
Aliivibrio salmonicida strain:DSM 21110
Aliivibrio salmonicida strain:DSM 21110 Genome sequencing and assembly
CAMI2 marine
Critical Assessment of Metagenome Interpretation marine raw sequencing data
Deep-sea Vibrios collected from coastal and oceanic sites in Japan
EMG produced TPA metagenomics assembly of PRJEB29346 data set (Metagenomic shotgun sequencing of the Atlantic cod intestinal microbiome).
EMG produced TPA metagenomics assembly of PRJEB31095 data set (The intestinal microbiome from two ecotypes of Atlantic cod and three additional Gadidae species.).
Bacterial Fish pathogen
Whole genome sequence analysis of Bacterial Fish pathogen
RNA seq A. salmonicida luxI and ainS mutants
Gene expression profiling of LuxI and AinS and inhabitation of biofilm formation in Aliivibrio salmonicida by N-acyl homoserine 3-oxo-C6 and 3OH-C10 in vitro
Aliivibrio salmonicida strain:VS224
Aliivibrio salmonicida strain:VS224 Genome sequencing
RNA seq A. salmonicida litR and rpoQ mutants
Transcriptome profiling analysis of ΔlitR and ΔrpoQ for better understanding of quorum sensing system in the fish pathogen Aliivibrio salmonicida
Fur mutant A. salmonicida
RNA seq study of fur mutant vs wt of A. salmonicida
Aliivibrio salmonicida LFI1238
The immediate global responses of Aliivibrio salmonicida to iron limitations
Aliivibrio salmonicida isolate:TEO83.001
Complete sequence of Aliivibrio salmonicida pVSAL111
Aliivibrio salmonicida isolate:Vs289
Complete sequence of Aliivibrio salmonicida pVSAL68
Refseq Prokaryotic Genome Annotation Project
V. salmonicida wild type strain LFI1238 and isogenic DlitR mutant grown as statical biofilm in SWT medium
V. salmonicida wild type strain LFI1238 and isogenic DlitR mutant grown in suspension in SWT medium
Prediction, microarray and Northern blot analyses identify new intergenic small RNAs in Aliivibrio salmonicida (wild type vs. LitR mutant)
Prediction, microarray and Northern blot analyses identify new intergenic small RNAs in Aliivibrio salmonicida (LB medium vs. iron-limited condition)
Expression profiling of a spf deletion mutant suggests biological roles and mRNA targets for Spot 42 in the fish pathogen Aliivibrio salmonicida
Global responses of Aliivibrio salmonicida to hydrogen peroxide
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