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10333.Manaus.3745.1313606; Dominguez Sloan SAWesternization gradient

Identifiers
BioSample: SAMEA104707939; SRA: ERS2309322
Organism
human skin metagenome
unclassified entries; unclassified sequences; metagenomes; organismal metagenomes
Attributes
agenot provided
collection date12/16/13
geographic locationGAZ:Brazil
diet100
dominant handright
elevation92
broad-scale environmental contexturban biome
local-scale environmental contexthuman-associated habitat
environmental packagehuman-skin
environmental mediumsebum
ethnicitymestizo
geographic locationBrazil:Manaus
height or length168
host body habitatUBERON:skin
host body productUBERON:sebum
host tissue sampledUBERON:skin of hand
host common namehuman
host subject id74-1
host taxonomy ID9606 (9606)
sample nameqiita_sid_10333:10333.Manaus.3745.1313606
sample typeskin
sexfemale
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-03-16T17:03:00Z
ENA-LAST-UPDATE2018-03-20T10:13:21Z
External IdSAMEA104707939
INSDC center nameUCSDMI
INSDC first public2019-03-16T17:03:00Z
INSDC last update2018-03-20T10:13:21Z
INSDC statuspublic
Submitter Idqiita_sid_10333:10333.Manaus.3745.1313606
ac_sampled_roomTRUE
accult_score6
age unityears
analysis_nameMan.3745.huma
animals_in_house0
anonymized nameManaus.3745
carbon_dioxide_insidenot provided
cats0
cleaning_frequency3x week
closed_trashTRUE
collection_timestamp12/16/13 0:00
dna_extractedTRUE
dogs0
dryerTRUE
fansTRUE
health_statno
hours_house_empty_day3
hours_house_empty_night0
house_number74
kitchen_exhaustFALSE
last_day_using_antibioticsmore than a year
latitude-3.11
longitude-60.026
multilevelno
number_humans_inhabiting_house3
number_outsiders_at_sampling8
orig_sample_nameManaus.3745
physical_specimen_locationUCSDMI
physical_specimen_remainingFALSE
publicTRUE
scientific_namehuman skin metagenome
species nameHomo sapiens
swimming_poolFALSE
use_soapsyes
villageManaus
washerTRUE
water_sourcemunicipal
weight74.6
wirelessTRUE
years_house_inhabited2
Description

skin r hand

BioProject
PRJEB25617 SAWesternization gradient
Retrieve all samples from this project

Submission
EBI; 2019-03-21
Accession:
SAMEA104707939
ID:
11185450

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