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Biofilm metagenome isolated from Urinary catheter BTPCE

Identifiers
BioSample: SAMN31269677; Sample name: BTPCE; SRA: SRS15430507
Organism
medical device metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes
Package
Metagenome or environmental; version 1.0
Attributes
isolation sourceUrinary catheter
collection date2021-12
geographic locationIndia:Kerala
latitude and longitude9.49 N 76.33 E
strainBTPCE
collected byHoney G and Dr. Sarita G Bhat,Department of Biotechnology,Cochin University Of Science and Technology
hostHomo sapiens
host diseaseCatheter Associated Urinary Tract Infection
Description

Metagenomic DNA was isolated from Urinary catheter and V3 and V4 regions of 16S rDNA was amplified using Illumina MiSeq Sequencing Platform to explore the diversity of biofilms in urinary catheter.

BioProject
PRJNA891204 Urinary catheter BTPCE metagenome raw sequence reads
Retrieve all samples from this project

Submission
CUSAT, Honey G; 2022-10-13
Accession:
SAMN31269677
ID:
31269677

SRA

Supplemental Content

Related information

  • SRA
    Links to SRA experiments
  • Taxonomy
    Links to Taxonomy

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