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FERA.139

Identifiers
BioSample: SAMN37194057; Sample name: 139 FERA.139 Ralstonia replicate7; SRA: SRS18759121
Organism
soil metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes
Package
Metagenome or environmental; version 1.0
Attributes
hostSolanum lycopersicum cv Moneymaker
isolation sourceThis plant has been treated with R. solanacearum UW551 (5 ml OD=0.7) and with water instead of bacteriophage solution. Soil extracted from tomato plants at the end of the experiment 22dpi (>6 week old).
collection date2022-11
geographic locationUnited Kingdom: York
latitude and longitude54.01739 N 0.97382 W
sample material processingSoil samples were collected at 22 dpi and processed in the same day: plants were cut as close to the soil as possible and the soil of the whole pot was homogenised manually. Tomato plants were growing in P24 pots in John Innes No2 Approximate 2g of the soil was stored at -80 °C for DNA extraction.
sample sizeApproximate 0.5g soil was used to extract DNA
Description

This plant has been treated with R. solanacearum UW551 (5 ml OD=0.7) and with water instead of bacteriophage solution. Soil extracted from tomato plants at the end of the experiment 22dpi (>6 week old).

BioProject
PRJNA1010659
Retrieve all samples from this project

Submission
CNAP, University of York, Sara Franco Ortega; 2023-08-30
Accession:
SAMN37194057
ID:
37194057

SRA

Supplemental Content

Related information

  • SRA
    Links to SRA experiments
  • Taxonomy
    Links to Taxonomy

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