One Health Enteric sample from Rahnella aceris - BioSample - NCBI

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One Health Enteric sample from Rahnella aceris

Identifiers: BioSample: SAMN42396281; Sample name: CFIA-AMR-2023-0106-OLC4890; SRA: SRS21951316

Organism: Rahnella aceris
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Rahnella

Package: One Health Enteric; version 1.0

Attributes

strain	CFIARB20230426
isolate name alias	OLC4890
collected by	Canadian Food Inspection Agency (CFIA) [GENEPIO:0100552]
collection date	2023-08-21
geographic location	Canada:Ontario
isolation source	Avocado [FOODON:00003600]; Ready-to-eat (RTE) [FOODON:03316636]; Food (sliced) [FOODON:00002455]; Food (frozen) [FOODON:03302148];
source type	food
purpose of sampling	Survey study [GENEPIO:0100582]
project name	WP4.2_ Frozen stone fruit
sequenced by	Canadian Food Inspection Agency (CFIA) [GENEPIO:0100552]
food product origin geographic location	Restricted Access [GENEPIO:0001810]
intended consumer	human as food consumer
food source	Avocado [FOODON:00003600]
food processing method	Ready-to-eat (RTE) [FOODON:03316636]; Food (sliced) [FOODON:00002455];
food preservation process	Food (frozen) [FOODON:03302148];
food product type	Avocado [FOODON:00003600]; Ready-to-eat (RTE) [FOODON:03316636]; Food (sliced) [FOODON:00002455]; Food (frozen) [FOODON:03302148];
food container or wrapping	Plastic bag, sack or pouch [FOODON:03490166]

BioProject: PRJNA1070647
Retrieve all samples from this project

Submission: Canadian Food Inspection Agency, Evelyn Yu; 2024-07-10

Antibiogram
Antibiotic	Resistance phenotype	Measurement sign	Measurement	Measurement units	Laboratory typing method	Laboratory typing platform	Vendor	Laboratory typing method version or reagent	Testing standard
cefoxitin	susceptible	==	1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ceftriaxone	intermediate	==	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
amoxicillin-clavulanic acid	susceptible	==	2/1	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ampicillin	resistant	>	32	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
meropenem	susceptible	==	0.06	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
azithromycin	not defined	==	0.5	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
chloramphenicol	susceptible	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
tetracycline	susceptible	==	4	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
ciprofloxacin	susceptible	==	0.06	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
nalidixic acid	susceptible	==	2	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
gentamicin	susceptible	==	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
sulfisoxazole	intermediate	>	256	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
trimethoprim-sulfamethoxazole	susceptible	==	0.12/2.38	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI
colistin	not defined	==	0.25	mg/L	MIC	Sensititre	Trek	96-Well Plate	CLSI

Accession:: SAMN42396281
ID:: 42396281

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