Metagenome-assembled genome: SRP187154_co1_171

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Result Filters

Organism: uncultured Wenzhouxiangella sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Chromatiales; Wenzhouxiangellaceae; Wenzhouxiangella; environmental samples

Attributes

broad-scale environmental context	terrestrial
collection date	2017-08-17
environmental medium	terrestrial
geographic location	not provided
investigation type	metagenome-assembled genome
isolation source	soil metagenome
project name	Metagenomic characterization of microbial fermentation bed system and ectopic fermentation system
sample name	SRP187154_co1_171
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	SRP187154_co1_171
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT;2.15;default
completeness score	99.57
completeness software	CheckM2;1.0.2;default
contamination score	0.14
geographic location (latitude)	not provided
geographic location (longitude)	not provided
local environmental context	soil biome
metagenomic source	soil metagenome
sample derived from	SAMN11039013,SAMN11039016
scientific_name	uncultured Wenzhouxiangella sp.
sequencing method	Illumina HiSeq 4000
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8648368,SRR8648371 of study SRP187154.