Metagenome-assembled genome: SRP257756_co1_75

Organism: uncultured Methylococcaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Methylococcales; Methylococcaceae; environmental samples

Attributes

broad-scale environmental context	aquatic
collection date	2017-02-15
environmental medium	aquatic
geographic location	Costa Rica
investigation type	metagenome-assembled genome
isolation source	subsurface metagenome
project name	These are metagenomes from subsurface fluids collected from a >400 km section of the Costa Rica convergent margin spanning the Nicoya Peninsula to the volcanic arc in the Northern and Central volcanic regions.
sample name	SRP257756_co1_75
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	SRP257756_co1_75
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT2;2.15;default
completeness score	85.89
completeness software	CheckM2;1.0.2;default
contamination score	7.01
geographic location (latitude)	9.901885
geographic location (longitude)	-85.454327
local environmental context	subsurface biome
metagenomic source	subsurface metagenome
sample derived from	SAMN14653531,SAMN14653530
scientific_name	uncultured Methylococcaceae bacterium
sequencing method	NextSeq 500
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11582139,SRR11582140 of study SRP257756.

BioProject: PRJEB82487 Bin Chicken Rare Biosphere Genomes
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BioSample