Metagenome-assembled genome: SRP072547_co1_304

Organism: uncultured Wenzhouxiangella sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Chromatiales; Wenzhouxiangellaceae; Wenzhouxiangella; environmental samples

Attributes

broad-scale environmental context	terrestrial
collection date	2012-01
environmental medium	terrestrial
geographic location	Mexico
investigation type	metagenome-assembled genome
isolation source	stromatolite metagenome
project name	We performed a comparative metagenomic analysis of microbialite samples along a depth gradient to characterise the functional profile of the microbialite-associated microbial communities.
sample name	SRP072547_co1_304
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	SRP072547_co1_304
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT;2.15;default
completeness score	99.44
completeness software	CheckM2;1.0.2;default
contamination score	1.28
geographic location (latitude)	19.25
geographic location (longitude)	-97.24
local environmental context	stromatolite biome
metagenomic source	stromatolite metagenome
sample derived from	SAMN04565676,SAMN04565677
scientific_name	uncultured Wenzhouxiangella sp.
sequencing method	Illumina HiSeq 2000
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR3310977,SRR3311162 of study SRP072547.

BioProject: PRJEB82487 Bin Chicken Rare Biosphere Genomes
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BioSample