Metagenome-assembled genome: binchicken_co222_88

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Result Filters

Organism: uncultured Methylobacillus sp.
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria; Nitrosomonadales; Methylophilaceae; Methylobacillus; environmental samples

Attributes

broad-scale environmental context	aquatic
collection date	not provided
environmental medium	aquatic
geographic location	not provided
investigation type	metagenome-assembled genome
isolation source	marine metagenome
project name	Seawater was filtered from different depths to retain small cell sizes. The DNA was extracted and submitted to high throughput sequencing.
sample name	binchicken_co222_88
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	binchicken_co222_88
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	MetaBAT2;2.15;default
completeness score	95.56
completeness software	CheckM2;1.0.2;default
contamination score	0.05
geographic location (latitude)	-31.027
geographic location (longitude)	4.6802
local environmental context	marine biome
metagenomic source	marine metagenome
sample derived from	SAMEA2621045,SAMEA2621037
scientific_name	uncultured Methylobacillus sp.
sequencing method	Illumina HiSeq 2000
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs ERR594348,ERR599056 of study ERP001737.