Metagenome-assembled genome: binchicken_co102_160

Organism: uncultured Methylococcaceae bacterium
cellular organisms; Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Methylococcales; Methylococcaceae; environmental samples

Attributes

broad-scale environmental context	aquatic
collection date	not provided
environmental medium	aquatic
geographic location	Indian Ocean
investigation type	metagenome-assembled genome
isolation source	hydrothermal vent metagenome
project name	The Old City hydrothermal field is a serpentinite-hosted ecosystem. As an analogue of the Lost City hydrothermal field, it offers the opportunity to study the microbial ecology influenced by serpentinization in such particular ecosystems.
sample name	binchicken_co102_160
ENA first public	2024-12-11
ENA-CHECKLIST	ERC000047
INSDC center name	CMR
INSDC status	public
Submitter Id	binchicken_co102_160
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes;3.15.4;default
binning parameters	coverage and kmer
binning software	SemiBin2;2.0.2;default
completeness score	62.18
completeness software	CheckM2;1.0.2;default
contamination score	1.51
geographic location (latitude)	not provided
geographic location (longitude)	not provided
local environmental context	hydrothermal vent biome
metagenomic source	hydrothermal vent metagenome
sample derived from	SAMN12349585,SAMN12349586,SAMN12349584
scientific_name	uncultured Methylococcaceae bacterium
sequencing method	NextSeq 500
taxonomic identity marker	multi-marker approach

Description: This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR9822616,SRR9822617,SRR9822619 of study SRP216209.

BioProject: PRJEB82487 Bin Chicken Rare Biosphere Genomes
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BioSample