MAG: Acidimicrobiaceae 2020-09-28 WE2

Identifiers: BioSample: SAMN45872459; Sample name: Acidimicrobiaceae samp_485_VAMB_202

Organism: Acidimicrobiaceae bacterium
cellular organisms; Bacteria; Bacillati; Actinomycetota; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; unclassified Acidimicrobiaceae

Attributes

collection date	2020-09-28T15:16:00Z
depth	0.75 m
broad-scale environmental context	large freshwater lake biome [ENVO:00000891]
local-scale environmental context	Lake [ENVO:00000020]
environmental medium	water [ENVO:00002006]
geographic location	USA: Lake Erie
latitude and longitude	41.7622833 N 83.330583 W
isolate	samp_485_VAMB_202
derived from	SAMN45078896
isolation source	lake water
sample type	metagenomic assembly
metagenome source	freshwater metagenome
size-fraction upper threshold	0.22 μm
temperature	18.97 °C
dissolved oxygen	7.69 mg/L
conductivity	262.98 μS/cm
turbidity	6 NTU
chlorophyll	7.8 μg/L
soluble reactive phosphorus	7.33 μg/L
particulate organic nitrogen	0.12 mg/L
particulate organic carbon	0.76 mg/L
suspended particulate matter	6.84 mg/L
sample collection device or method	peristaltic pump
wind speed	3.89 knots
collection method	peristaltic pump
pH	8.45
SampleID	samp_485
GAZ_id	GAZ:00003932
Completeness (%)	91.17
Contamination (%)	5.39
Strain heterogeneity (%)	55.56
metagenomic	1
environmental-sample	1
NOAA_Site	WE2
keywords	HABs
depth_at_sampling_location	5.36 m
diss_microcyst	0.17 μg/L
ext_phyco	4.62995942 μg/L
tot_phos	30.28 μg/L
diss_phosp	12.66 μg/L
ammonia	4.08 μg/L
Nitrate_Nitrite	0.004
Col_DOM	0.54
suspend_vol_solid	2.28 mg/L
ice_cover	0 %
modified_or_experimental	False
is_isolate	False
is_blank_neg_control	False
is_mock_community_or_pos_control	False
sky	cloudy
wave_height	0.66 ft
sortchem	E2020-0118
nitrate_nitrite	0.004 mg/L
col_dom	0.54 µg/L
secchi	1 m

BioSample