Metagenome-assembled genome: vVEzczfi8f_bin.27.MAG

Organism: Aerococcus urinaeequi
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Aerococcaceae; Aerococcus

Attributes

collection date	not provided
broad-scale environmental context	human-associated habitat
local-scale environmental context	human skin
environmental medium	skin
geographic location	USA
investigation type	metagenome-assembled genome
isolation source	human skin
project name	Skin Microbial Genome Catalogue
sample name	vVEzczfi8f_bin.27.MAG
ENA first public	2022-06-13
ENA last update	2022-06-13
ENA-CHECKLIST	ERC000047
External Id	SAMEA110089414
INSDC center alias	NIH/NHGRI
INSDC center name	NIH/NHGRI
INSDC first public	2022-06-13T04:18:29Z
INSDC last update	2022-06-13T04:18:29Z
INSDC status	public
Submitter Id	vVEzczfi8f_bin.27.MAG
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	metaSPAdes v.3.13.0
binning parameters	MaxBin2, MetaBat2, Concoct with default parameter of the Metawrap pipeline. Bin refinement module used from metawrap with default parameters
binning software	metaWRAP v1.2.1
completeness score	78.26
completeness software	CheckM v1.1.2
contamination score	78.26
geographic location (latitude)	not provided
geographic location (longitude)	not provided
metagenomic source	human skin metagenome
sample derived from	SAMN17584330,SAMN17584331,SAMN17584332,SAMN18796947,SAMN18796958,SAMN18796970
sequencing method	Illumina
taxonomic identity marker	multi-marker approach

Description: This sample represents a Pool HV Metagenome-Assembled Genome (MAG) from the metagenomic run(s): SRR14198840,SRR14198841,SRR14198842,SRR14332512,SRR14332513,SRR14332534,SRR14332535,SRR14332558,SRR14332559.

BioProject: PRJEB47281 Skin Microbial Genome Catalogue
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BioSample