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Metagenome-Assembled Genome: SRR3968063_bin.12_MetaWRAP_v1.3_MAG

Identifiers
BioSample: SAMEA112958175; SRA: ERS14953596
Organism
uncultured Candidatus Poseidoniales archaeon
cellular organisms; Archaea; Methanobacteriati; Thermoplasmatota; Candidatus Poseidoniia; Candidatus Poseidoniales; environmental samples
Attributes
broad-scale environmental contextAquatic
collection date2010-12-28
environmental mediumDeep Atlantic Ocean
geographic locationAtlantic Ocean
investigation typemetagenome-assembled genome
isolation sourcemarine metagenome
project nameMarine microbial communities from the Deep Atlantic Ocean - MP0203 metagenome
sample nameSRR3968063_bin.12_MetaWRAP_v1.3_MAG
ENA-CHECKLISTERC000047
ENA-FIRST-PUBLIC2023-04-24
ENA-LAST-UPDATE2023-04-24
External IdSAMEA112958175
INSDC center aliasEMG
INSDC center nameEMG
INSDC first public2023-04-24T16:16:30Z
INSDC last update2023-04-24T16:16:30Z
INSDC statuspublic
Submitter IdSRR3968063_bin.12_MetaWRAP_v1.3_MAG
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly softwaremetaSPAdes
binning parametersMaxBin2, MetaBat2, Concoct with default parameter of the metaWRAP pipeline. Bin refinement module used from metaWRAP with default parameters.
binning softwareMetaWRAP v1.3
broker nameEMG broker account, EMBL-EBI
completeness score85.2
completeness softwareCheckM
contamination score0.4
geographic location (latitude)7.33
geographic location (longitude)-26.0
local environmental contextMarine
metagenomic sourcemarine metagenome
sample derived fromSAMN05421660
scientific_nameuncultured Candidatus Poseidoniales archaeon
sequencing methodIllumina HiSeq 2000
taxonomic classificationThe taxonomy of this Metagenome-Assembled Genome was originally computed with GTDBtk, which assigned the following taxonomic annotation: d__Archaea;p__Candidatus Thermoplasmatota;c__Candidatus Poseidoniia;o__Candidatus Poseidoniales;f__;g__;s__
taxonomic identity markermulti-marker approach
Description

This sample represents a metagenome-assembled genome assembled from the metagenomic run SRR3968063 of study SRP080082.

BioProject
PRJEB26202
Retrieve all samples from this project

Submission
EBI; 2023-04-29
Accession:
SAMEA112958175
ID:
34438247

BioProject Nucleotide

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